| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1208 |
|---|
| Symbol | |
|---|
| ID | 4885110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 1189465 |
|---|
| End bp | 1190733 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640127136 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001058257 |
|---|
| Protein GI | 126441788 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTCC GGCATACGGT CAGCGCGCGT AGCCTGCGCG CCCTCGACTG GCTCAACTTC
TTCGTCGCGA ACGTGCAGAC AGGCTTCGGT CCGTTCATCG CGTCGTATCT CGCGTCGCAC
AAGTGGACGC AGGGCGAAAT CGGCATGGTG CTGTCGATCG GCACGATCAG CGCGATGGTG
AGCCAGGTGC CCGGCGGCGC GGCCGTCGAT GCGCTGAAGA ACAAGAAAGG CGCCGCCGCG
TGGGCGATCG CCGCGATCAT CCTGTCCGCG GTGCTGCTCG CCGCGAGCCC GACCGTCGTG
CCCGTGATCG CGGCCGAGGT GTTCCACGGC TTCGCGAGCT GCATGCTCGT GCCGGCAATG
GCGGCGATCT CGTTCGCGCT CGTCGGCCGC GAGAGCCTGG GCGACCGGCT CGGCCGCAAC
GCGCGCTGGG CGTCGCTCGG CAGCGCGGTC GCGGCGGGTC TGATGGGGCT CACGGGCGAG
TACTTCTCCG CGCGCGCGGT GTTCTGGCTG ACGGCGGCCC TCGCGCTGCC CGCGCTCGTC
GCGCTCGCGA TGATCGAGCC GACGCACCAT CATCATCACG CGGCGCCACG CGCGTCGGCG
CGAAGCGACG AAGCCGACGA AGACGAAGAC GAAGAACGCG AAACGCTGCG CGAACTGCTG
CGCGACAAGC GGATGCTGAT CTTCGCCGCC TGCGTCGTGT TGTTCCATCT GTCGAACGCG
GCGATGCTGA ACCTCGCCGC GGGCGAAGTG ACGGCGGGCA TGGGCGAGAA CGTGCAGCTC
GTGATCGCCG CGTGCATCAT CGTCCCGCAG GCGATCGTCG CGATGCTCTC GCCGTGGGTC
GGACGCTCCG CGCAGCGCTG GGGCCGCCGG CCGATCCTGC TGCTCGGTTT CGCCGCGCTG
CCGCTGCGCG CGCTGCTGTT CGCCGGCGTC TCGAGCCCGT ACCTGCTCGT GCCGGTGCAG
ATGCTCGACG GCATCAGCGC CGCCGTGTTC GGCGTGATGC TGCCGCTCAT CGCGGCGGAC
GTCGCGGGCG GCAAGGGGCG CTACAACCTG TGCATCGGGC TCTTCGGACT CGCGGCGGGC
GTCGGCGCGA CGCTCAGCAC CGCGCTCGCC GGCTTCGCGG CCGACCACTT CGGCAACGCG
ATGAGCTTCT TCGGGCTCGC CGCCGCGGGC GCGCTCGCGA CGCTGCTCGT GTGGTTCGCG
ATGCCCGAGA CGCGCGACGC GGCGCTCGCC GAAGACGCTC GGCACTCGAG CGCCGAGCCG
GCGCAGTAA
|
|---|
| Protein sequence | MTVRHTVSAR SLRALDWLNF FVANVQTGFG PFIASYLASH KWTQGEIGMV LSIGTISAMV
SQVPGGAAVD ALKNKKGAAA WAIAAIILSA VLLAASPTVV PVIAAEVFHG FASCMLVPAM
AAISFALVGR ESLGDRLGRN ARWASLGSAV AAGLMGLTGE YFSARAVFWL TAALALPALV
ALAMIEPTHH HHHAAPRASA RSDEADEDED EERETLRELL RDKRMLIFAA CVVLFHLSNA
AMLNLAAGEV TAGMGENVQL VIAACIIVPQ AIVAMLSPWV GRSAQRWGRR PILLLGFAAL
PLRALLFAGV SSPYLLVPVQ MLDGISAAVF GVMLPLIAAD VAGGKGRYNL CIGLFGLAAG
VGATLSTALA GFAADHFGNA MSFFGLAAAG ALATLLVWFA MPETRDAALA EDARHSSAEP
AQ
|
|---|
| |