| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1198 |
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| Symbol | msbA |
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| ID | 4882787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | + |
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| Start bp | 1178309 |
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| End bp | 1180036 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640127126 |
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| Product | lipid A export ATP-binding/permease protein MsbA |
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| Protein accession | YP_001058247 |
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| Protein GI | 126440231 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGCGCC GCCTCTGGCC GTATGTGAAA CCGCTGGTAT GGGTGCTCGT CGCAGGCGTG
CTCGCGATGG CGGCGGTCGC CGCGACGGAA GCCGGAATTC CCGCGCTGCT CAAGCCGCTT
CTCGACCATG GCTTCGGCTC GAAGGGGGAC ATGACGACGA AGCTGTACGT GCCTGCGGCG
GTCGTCGGTC TCGCGCTCGC GCGCGCGATC GCGCAATATG CGTCCGGCTA TCTGCTGCAG
TACGTGTCGA ACCGCATCCT GCTCGATCTG CGGATCCAGA TGTTCGAGCG GATGATTCAC
ACCGGCGTGT CGTTCTTCCA GCGCGAGACG GCAAGCACGG TGATCAACGC GGTCGTGTTC
GAAGTGAACC AGGTGCTGAG CGTGCTGATG GGCGTGACGA TCACGCTCGT GCGCGATTCG
CTGACGGTCG TCTTCCTGCT CGGCTATCTG TTCTATCTGA ACTGGCGCCT GACGCTCATC
GTCGCGATTC TGTTGCCGTG CATCGGCTGG CTCGTCGGCA AGATCAACCG TCGGCTGCGC
CGGCTGAACC GCGAGCATCA GACGCTCACG AACCAGCTCG CGTACATCGT CGAGGAGACC
GTCGGCGGCT ACAAGGTCGT CAAGGTTCAT AACGGCGAAC CATACGAGAT CGGGCGCTTC
AACGAGCTGA GCCGCAAGCT GCGCGGCTAT TCGATGCGCA TGACGGTATC GGGCGGGCTT
GCCCAGCCGC TCACGCAGTT CCTCGCATCG ATCGCGCTCG CTGTCGTGCT GACGATTGCG
GTCGTTCAGT CGGCGAACGA TCAGACGACG GTCGGCGGCT TCGTCGCGTT CGTGACCGCG
ATGCTGCTCA TCATTTCGCC GCTCAAGCAT CTGATGGACG TGAACCAGCC GCTGCAGCGC
GGGATGACCG CGGCCGAGCT GATCTTCGGG CTGATCGACG AGCCGCGTGA GCCCGAAGGC
GGCGGCAAGC CGCTCGCACG CGCGTCGGGG GCGATCGAGT TCAGCCATGT GTCATTCTCT
TACGGCATGT CGCGCGATGG CCGGCAAACG CTCGACGACG TATCGTTTAC CGTCGCGCCG
GGCGAGATGG TCGCGCTCGC GGGCCCGTCC GGCAGCGGCA AGACGACGCT CGTGAATCTG
CTGCCGCGCT TCTTCGATCC TTCGTCGGGC TCGGTGCGTG TCGATGGCGT CGCGCTCCCC
GAGTACAGCC TGCGCGACCT GCGCAATCAG ATTGCGATGG TGAGCCAGGA CGTCGTGCTC
TTCAACGATA CGATCGCCGC GAACGTCGCG TACGGCCAGG CGCCCGAACG CGACCGCGTG
GAGGCGGCAC TGCGTGCGGC GAACCTATGG GAAACCGTCA CCGCGATGCC CGACGGCATC
GATACACTCG TCGGCGACAA CGGGATGCGG CTGTCGGGCG GCCAGCGCCA GCGGCTCGCG
ATCGCCCGTG CGATCTACAA GGATGCGCCG ATCCTGATTC TCGACGAGGC GACGTCCGCG
CTCGATTCCG AATCGGAGCG GCACGTGCAG GCGGCGCTCG AGACGCTGAT GAAGGGGCGC
ACGACGCTCG TGATCGCGCA CCGCCTGTCG ACGATCGAGC GCGCCGACCG GATCCTTGTG
CTCGAAGGCG GCAAGATCGT CGAAAGCGGC AGCCACCGCG AATTGCTCGA GCAGGGCGGG
CTCTACGCGC ACCTGCACCG CATCCAGTTC CAGCAGGACG CGGGATGA
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| Protein sequence | MMRRLWPYVK PLVWVLVAGV LAMAAVAATE AGIPALLKPL LDHGFGSKGD MTTKLYVPAA
VVGLALARAI AQYASGYLLQ YVSNRILLDL RIQMFERMIH TGVSFFQRET ASTVINAVVF
EVNQVLSVLM GVTITLVRDS LTVVFLLGYL FYLNWRLTLI VAILLPCIGW LVGKINRRLR
RLNREHQTLT NQLAYIVEET VGGYKVVKVH NGEPYEIGRF NELSRKLRGY SMRMTVSGGL
AQPLTQFLAS IALAVVLTIA VVQSANDQTT VGGFVAFVTA MLLIISPLKH LMDVNQPLQR
GMTAAELIFG LIDEPREPEG GGKPLARASG AIEFSHVSFS YGMSRDGRQT LDDVSFTVAP
GEMVALAGPS GSGKTTLVNL LPRFFDPSSG SVRVDGVALP EYSLRDLRNQ IAMVSQDVVL
FNDTIAANVA YGQAPERDRV EAALRAANLW ETVTAMPDGI DTLVGDNGMR LSGGQRQRLA
IARAIYKDAP ILILDEATSA LDSESERHVQ AALETLMKGR TTLVIAHRLS TIERADRILV
LEGGKIVESG SHRELLEQGG LYAHLHRIQF QQDAG
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