| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_1164 |
|---|
| Symbol | |
|---|
| ID | 4882502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 1141888 |
|---|
| End bp | 1143438 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640127092 |
|---|
| Product | solute/sodium symporter (SSS) family protein |
|---|
| Protein accession | YP_001058213 |
|---|
| Protein GI | 126439622 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGA CCGCGACCTT CGTCTTCGTG CTGTTCTTCG TCGGCGTGAC GATCATGGGT
TTTCTCGCCG CGAACTGGCG GCGCGGCAAC CTCGCGCATC TCGACGAATG GGGGCTCGGC
GGCCGGCGCT TCGGCACGGT CGTCACGTGG TTCCTGCTCG GCGGCGATCT CTACACCGCG
TACACGTTCG TCGCCGTGCC GGCGCTCGTG TTCGGCGCGG GCGCGATGGG CTTCTTCGCG
CTGCCGTACA CGATCCTCAT CTATCCGTTC GCGTTCGTCG TATTCCCGAA GCTCTGGAGC
ATCGCGAAGC GTCACGGCTA CGTGACGGCC GCCGATTTCG TCAACGCGCG CTACGGCAGC
CGCTCGCTCG CGCTCGCCGT CGCGGTGACG GGCATCGTCG CGACGATGCC GTACATCGCG
CTGCAGCTCG TCGGCATCGA GGTGGTGATC GGCGGGCTCG GCTTCGACAC CAAGGGCTTC
ATCGGCGATC TGCCGCTCAT CATCGCGTTC GCGATCCTCG CCGCTTACAC GTACACGTCG
GGGCTGCGTG CGCCCGCGAT GATCGCGATC GTCAAGGACA TCCTGATCTA CATCACGATC
GCCGCGGCCG TGATCGTGAT TCCGGCGAAG CTGGGCGGCT TCGGGCACAT CTTCGGCGCG
GTGCCGCCCG CGAAGCTGCT GTTGAAAGCG CCCGACGCGG CGAGCCTGAA CGGCTTCAGC
GCGTACACGA CGCTCGCGAT CGGCTCGGCG CTCGCGCTGT TCCTGTATCC GCACTCGGTG
ACGGCGATCC TGTCGTCGTC GTCGGGCAAC ACGATCCGCC GCAACATGGC GATGCTGCCC
GCGTACTCGT TCGTGCTCGG CCTGCTGGCG CTGCTCGGCT ACATGGCGCT CGCATCGGGC
GTGAAGGACA TGCCGGAATA CGCGCCGTAC TTCAAGGCGT TCGGCCCGAA TTTCGCGGTG
CCGGCGTTGT TCCTGCATTT CTTCCCGTCG TGGTTCGTCG GCGTCGCGTT CGCCGCGATC
GGGATCGGCG CGCTCGTGCC GGCGGCGATC ATGTCGATCG CGGCCGCGAA CCTGTACACG
CGCAACATCC ATCGCGAGTT CGTCAACCGC AACATGACGC ACGATCAGGA AACGCACGTC
GCGAAGCTCG TGTCGCTGAT CGTGAAGGTC GGCGCGGTCG CGTTCATTCT CGGGCTGCCG
CTCACCTACG CGATCCAGCT GCAACTGCTC GGCGGGATCT GGATCATCCA GACGCTGCCC
GCGATCGTGC TCGGGCTCTA TACGCGCGTG CTCGACTATC GCGGGCTGCT CGCCGGCTGG
GCGGCGGGGC TCGTCTGCGG CACGTGGATG GCGATTTCGC TGAAGCTCGC GAGCTCGATC
TTCACGATCC ATCTGTTCGG CCATGCGATT CCGGGCTACG CGGCCGTCTG GGCGCTGGCC
GTGAATCTCG TCGTGTCGAT CGTGGCCAGC GTGCTGGTTC GCGCGTTCGG GATCGCGCAC
GCGGAAGATC GCACGCGGCC GGAGGATTAT CTCGACGTCG TCGAGAGTTG A
|
|---|
| Protein sequence | MNLTATFVFV LFFVGVTIMG FLAANWRRGN LAHLDEWGLG GRRFGTVVTW FLLGGDLYTA
YTFVAVPALV FGAGAMGFFA LPYTILIYPF AFVVFPKLWS IAKRHGYVTA ADFVNARYGS
RSLALAVAVT GIVATMPYIA LQLVGIEVVI GGLGFDTKGF IGDLPLIIAF AILAAYTYTS
GLRAPAMIAI VKDILIYITI AAAVIVIPAK LGGFGHIFGA VPPAKLLLKA PDAASLNGFS
AYTTLAIGSA LALFLYPHSV TAILSSSSGN TIRRNMAMLP AYSFVLGLLA LLGYMALASG
VKDMPEYAPY FKAFGPNFAV PALFLHFFPS WFVGVAFAAI GIGALVPAAI MSIAAANLYT
RNIHREFVNR NMTHDQETHV AKLVSLIVKV GAVAFILGLP LTYAIQLQLL GGIWIIQTLP
AIVLGLYTRV LDYRGLLAGW AAGLVCGTWM AISLKLASSI FTIHLFGHAI PGYAAVWALA
VNLVVSIVAS VLVRAFGIAH AEDRTRPEDY LDVVES
|
|---|
| |