Gene BURPS668_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_1107 
Symbol 
ID4884591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp1083186 
End bp1084559 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content72% 
IMG OID640127035 
Producttransport protein YebQ 
Protein accessionYP_001058157 
Protein GI126440754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCG ACTCCGGACT GCCGTTCCCG CAACGCTACT GGGCGATCGT CTGCGTCGCG 
CTGGGCATCA CGCTCGCCGT GCTCGACGGC GCGATCGCGA ACGTCGCGCT GCCGACGATC
GCCCGCGATC TGCACGCCTC CGACGCCGCG TCGATCTGGA TCGTCAACGC GTACCAACTC
GCCGTCACGA TCTCGCTGCT GCCGCTCGCC TCGCTCGGGG ACCGCATCGG CTACCGGCGC
GTCTACATCG CGGGGCTCAT GCTCTTCACG GCGGCGTCGC TCGGCTGCGC GCTGTCGGGC
ACGCTGCCCG CGCTCGCGAC GCTGCGCGTG ATCCAGGGCT TCGGCGCGGC CGGCATCATG
AGCGTGAATA CCGCGCTCGT GCGGATGATC TATCCGTCTT CGCAACTCGG GCGCGGCGTC
GCGATCAACG CAATGGTCGT CGCGCTGTCG TCGGCGGTCG GGCCGACCGT CGCGTCCGCG
GTGCTCGCCG TCGCGCCGTG GCCGTGGCTC TTCGCGATCA ACGTGCCGAT CGGCGTCGCC
GCCGTGTGCG GCAGCCTGCG CGCGCTGCCG GCGAATCCGG GCCGCAGCGC GCCGTACGAT
TTCATCGGCG CCGTGATGAA CGCCTGCGTG TTCGGGCTGT TGATCGTGTC CGTCGACGGG
CTCGGCCACG GCGGGAATCG CGCGAGCGTC GCGCTCACCG CGCTCGCGGC CGCCGTGATC
GGCTACTTCT TCGTCAAGCG CCAGTTGACG CAGCCCGCGC CGCTGTTGCC CGTCGACCTG
CTGCGCGTTC CGATCTTCGC GCTGTCGATC GGCACATCGG TCGCGTCGTT CACGTCGCAG
ATGCTCGCGT TCGTCGCGCT GCCGTTCTGG CTACAGAACA CGCTCGGCTT CTCGCAGGTC
CAGACGGGGC TCTACATGAC GCCGTGGCCG CTCGTGATCG TCGTCGCGGC GCCGCTCGCG
GGCGTGCTGT CCGACCGCTA TTCGGCGGGC GCGCTGGGCG GCATCGGCCT CGCCCTGTTC
GCATCCGGCC TGTTCGCGCT CGCGACGATC GGTGCGCACC CGACGCCCGT CGACATCGTG
TGGCGGATGG CGCTGTGCGG CGCGGGCTTC GGGCTCTTCC AGTCGCCGAA CAACCGCGCG
ATCCTGTCGT CCGCGCCGCG CGAGCGCGCG GGCGGCGCAA GCGGGATGCT CGGCACCGCC
CGGCTCACCG GACAAACGCT CGGCGCCGCG CTCGTCGCGC TGATCTTCGG CATCGCGCCG
CAGCACGGGC CGACGATCGC GCTCTACGCG GCGAGCTCGT TCGCCGCCGT CGCGGCGGCC
GTGAGCCTGC TGAGAATCCG CGCGCGGCGC GATACGACCG CCGCGGCGGG TTGA
 
Protein sequence
MNADSGLPFP QRYWAIVCVA LGITLAVLDG AIANVALPTI ARDLHASDAA SIWIVNAYQL 
AVTISLLPLA SLGDRIGYRR VYIAGLMLFT AASLGCALSG TLPALATLRV IQGFGAAGIM
SVNTALVRMI YPSSQLGRGV AINAMVVALS SAVGPTVASA VLAVAPWPWL FAINVPIGVA
AVCGSLRALP ANPGRSAPYD FIGAVMNACV FGLLIVSVDG LGHGGNRASV ALTALAAAVI
GYFFVKRQLT QPAPLLPVDL LRVPIFALSI GTSVASFTSQ MLAFVALPFW LQNTLGFSQV
QTGLYMTPWP LVIVVAAPLA GVLSDRYSAG ALGGIGLALF ASGLFALATI GAHPTPVDIV
WRMALCGAGF GLFQSPNNRA ILSSAPRERA GGASGMLGTA RLTGQTLGAA LVALIFGIAP
QHGPTIALYA ASSFAAVAAA VSLLRIRARR DTTAAAG