Gene BURPS668_1054 details

Gene Information

• Locus tag: BURPS668_1054
• ID: 4885557
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 1029351
• End bp: 1029998
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640126982
• Product: ompA family protein
• Protein accession: YP_001058104
• Protein GI: 126440263
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACCA AAATCGCGAC GCGCTTGTCC GTTTTCGCTC TCGCCGGCGC CCTGCTGGCG 
GGTTGCGCAA CCCAGCAAGG CACCAACACG GCTGTCGGCA CCGGCACGGG CGCCGCGCTC 
GGCGCGGGCA TCGGCGCGCT CGCTGGCGGC GGCAAGGGCG CGGCGATCGG CGCCGGCGTC 
GGCGCGCTCG TCGGCGGCGT GACGGGTTAC AACTGGCAAG CGATCAAGAA CAAGCTCGCG 
CCGTCGGCGC AGCAAACGGG CACGCAGGTC ACCGAACAGC CGGACGGCTC GCTCAAGCTG 
AACGTGCCCA GCTCGGTCAC GTTCGCGACC GACCAGTACG CGATCACGCC GGCGTTCACG 
CCGCTGCTGA ACGACCTCGC GACGACGCTG AACCAGAACC CGCAGATCAC CGCGTCGGTC 
GTCGGCTACA CCGACAGCAC GGGCTCGGCC GCGCACAATC AGACGCTGTC GCAAAATCGC 
GCGCAAAGCG TCGTGAACGC GCTCGCGCAG CGCGGCGTCG CGGCGAACCG CCTGTCCGCG 
CAAGGCATGG GCGCGTCGAA CCCGATCGCC GACAACGCAA CGGAAGCCGG CCGCGCGCAA 
AACCGCCGCG TCGAGATCTA CCTGCGCGCG CCGCAAGCGG CGCAGTAA 

 

Protein sequence

MNTKIATRLS VFALAGALLA GCATQQGTNT AVGTGTGAAL GAGIGALAGG GKGAAIGAGV 
GALVGGVTGY NWQAIKNKLA PSAQQTGTQV TEQPDGSLKL NVPSSVTFAT DQYAITPAFT 
PLLNDLATTL NQNPQITASV VGYTDSTGSA AHNQTLSQNR AQSVVNALAQ RGVAANRLSA 
QGMGASNPIA DNATEAGRAQ NRRVEIYLRA PQAAQ