Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_1036 |
Symbol | cobD |
ID | 4882455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 1009045 |
End bp | 1010097 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640126964 |
Product | putative threonine-phosphate decarboxylase |
Protein accession | YP_001058086 |
Protein GI | 126441474 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.50973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACG CGCCGATCAC GCACGGCGGC AACCTGCACG AAGCCGCCCT TCGCTACGGC ATCCCGCGCG ACGCGTGGCT CGATCTGTCG ACGGGCATCA ATCCGCACGG TTTTCCGGTG CCGCCCGTGC CCGCCGACGC GTGGCGCCGG CTGCCCGAGG ACGACGGCGT GCTCGCCGCG CACGCGGCGC GCTACTACCG CGCGCCGGGC GCGACGCACG TGCTGCCCGT CGCGGGCAGC CAGGCGGCGA TCCGTGCGCT GCCGGCGCTT TTCGCGCGCG GCACGGTCGG CGTCGCGCCG CTCGCATACA GCGAGTACGC GCCCGCGTTC GCGCGCCACG GCCATTCGGG CGCGCCGCTC GACTGCGGCG CCGACACGCT GCCCGCCGCG CTCACGTACG CGATCGTCGC CAATCCGAAC AATCCGACCG CCGAACGCGT CGATCGCGCG CGGCTGCTGC GCTGGCACGC GCAACTCGTC GCGCGCGGCG GCGCGCTGAT CGTCGACGAG GCGTTCGCGG ACGCCGAGAG CGCCGCGCAC GCGTCGCTCG CCGCGGACAC GCATCGCGAC GGCCTCGTCG TATTGCGCTC GGTCGGCAAG TTCTTCGGCC TCGCGGGCGT GCGCGCGGGC TTCGCGCTCG CCGCGCCCGC GCTGCTCGCG CGGCTGCGCG ACGCGCTCGG CGCGTGGACC GTCAGCGGCC CGGCGCGCCA CGCGGTGCTC GCCGCGTTCG CGGACGCGGC GTGGCAGCAC GCGATGCGCG AGCGGCTCGC GCATGACGGC GCGCGCCTTG CCGCGCTGCT GCGCGCGCAC GGCTTCGTCA CGCACGCGAC GCCGCTTTTC AGCTGGAGCG CCGATCCGCG CGCGCACGCG CTGCACGACG CGCTCGCCGC GCGCGGAATC TGGACGCGCT ACTTCGCGCA CGCGCCGAGC GTGCGCATCG GGCTGCCCGC CGGCGACGAC GACTGGCGGC GGCTCGAACG CACGCTCGCC GAGTGCGTGC CGACGCTAGC GGCCGCCGCC GCGCATCCTT CCGAATCGAC CACACGGGAT TGA
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Protein sequence | MADAPITHGG NLHEAALRYG IPRDAWLDLS TGINPHGFPV PPVPADAWRR LPEDDGVLAA HAARYYRAPG ATHVLPVAGS QAAIRALPAL FARGTVGVAP LAYSEYAPAF ARHGHSGAPL DCGADTLPAA LTYAIVANPN NPTAERVDRA RLLRWHAQLV ARGGALIVDE AFADAESAAH ASLAADTHRD GLVVLRSVGK FFGLAGVRAG FALAAPALLA RLRDALGAWT VSGPARHAVL AAFADAAWQH AMRERLAHDG ARLAALLRAH GFVTHATPLF SWSADPRAHA LHDALAARGI WTRYFAHAPS VRIGLPAGDD DWRRLERTLA ECVPTLAAAA AHPSESTTRD
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