| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0993 |
|---|
| Symbol | |
|---|
| ID | 4883693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 970755 |
|---|
| End bp | 971477 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640126921 |
|---|
| Product | RNA pseudouridine synthase family protein |
|---|
| Protein accession | YP_001058044 |
|---|
| Protein GI | 126440770 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0275653 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG AAAGCATTCT GTTCACCCAA GGCTTCGGTT CGCGCCGCCA GTGCCGCGCG
CTCGTCGAAG CGGGACACGT CGCCGTCGGC GGCGCGACGT GCGCCGACGC GCACGCATCG
TTCGACACCA CGCAGCTCGT GTTCGAAGTC GACGGCGTCG CCTGGCCGTA CCGCGCGCGC
GCTTACGTCG CGCTCAACAA GCCGGCCGGC TACGAATGCT CGCGCGAGCC GCAGCATCAT
TCGAGCGTGT TCGCGCTGCT GCCGCCGCAG TTCGCCGAGC GCGGCGTCCA GTGCGTCGGC
CGCCTCGACC AGGACACGAC GGGCCTGCTG CTCCTGTCCG ACGACGGCCA GTTCGTCCAC
GCGTACACGT CGCCGAAACG CAAGGTGCCG AAGACCTATG TCGCGACGGT GCGCCACCCG
CTCGACGACG CGCAGCTCGA CGCGCTGCGC GCGGGCGTGC TGCTGCACGG CGAGCCGAAA
CCGGTCGCCG CGCTCGCCGC CGTTGCCCGA GGAGAACGAC TCCTCGAAAT GACGATCGCC
GAAGGGAAAT ACCACCAGGT GAAGCGCATG GTCGCCGCCG CGAGCAACCG CGTCGAGGCG
TTGCACCGCT CGCGCATCGG CGGCTTCGCG CTGCCCGAGG ATCTCGCCGA AGGCGCGTGG
CGCTGGCTCG ACGAACGCGA TCTCGCCGCC TTGCGCGACA CGGCGGAAAC CCTGTCAGGG
TAA
|
|---|
| Protein sequence | MDLESILFTQ GFGSRRQCRA LVEAGHVAVG GATCADAHAS FDTTQLVFEV DGVAWPYRAR
AYVALNKPAG YECSREPQHH SSVFALLPPQ FAERGVQCVG RLDQDTTGLL LLSDDGQFVH
AYTSPKRKVP KTYVATVRHP LDDAQLDALR AGVLLHGEPK PVAALAAVAR GERLLEMTIA
EGKYHQVKRM VAAASNRVEA LHRSRIGGFA LPEDLAEGAW RWLDERDLAA LRDTAETLSG
|
|---|
| |