Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0954 |
Symbol | |
ID | 4885161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 931574 |
End bp | 932152 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640126882 |
Product | RNA pseudouridine synthase family protein |
Protein accession | YP_001058005 |
Protein GI | 126439533 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTCA TCGCCCTCAA CAAGCCGTTC GGCACGATCT GCCAGTTCTC TGCGCACGAA ACCCGCGCAT CGCTCGGCGA CTGGGTGAAG ACGCCCGGCG TCTATCCGGC GGGCCGCCTC GATGCCGACA GCGAGGGGCT GCTCCTGCTC ACCGACGACG GCGCGCTGCA GGCGAAGATC GCCGAGCCGC GCCACAAGCT CGTCAAGCGC TACTGGGCGC AGGTCGAGGG CGCGCCCGAC GCGGCCGCGC TCGCCGCGCT CGAGCGCGGC GTCGATCTCG GCGATTACGT GAGCCGCCCG TGTCGCGCGC GCTTCATCAC GCCGCCCGGC GCGCTCTGGC CGCGCAACCC GCCGATCCGC CACCGCGCGG CGATCCCGAC GGCCTGGATC GAGCTCGAGA TCGCCGAAGG CAAGAACCGC CAGGTGCGGC GAATGACCGC GGCCGTCGGC TTCCCGACGC TGCGCCTCGT TCGCGTCGGC ATCGGCGCGC TCGACGTGTT CGCGCTCGGC CTTGCGCCGG GCGAAACGCG CGAGCTGCCG CCGCGCGCGC CGTGGGAACG CGCACAGCGG CCCGGATGA
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Protein sequence | MRLIALNKPF GTICQFSAHE TRASLGDWVK TPGVYPAGRL DADSEGLLLL TDDGALQAKI AEPRHKLVKR YWAQVEGAPD AAALAALERG VDLGDYVSRP CRARFITPPG ALWPRNPPIR HRAAIPTAWI ELEIAEGKNR QVRRMTAAVG FPTLRLVRVG IGALDVFALG LAPGETRELP PRAPWERAQR PG
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