| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0921 |
|---|
| Symbol | mviN |
|---|
| ID | 4885680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 899513 |
|---|
| End bp | 901063 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640126849 |
|---|
| Product | integral membrane protein MviN |
|---|
| Protein accession | YP_001057972 |
|---|
| Protein GI | 126439289 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
|---|
| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.432333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAT TCCGAGCCCT GCTGACGGTC AGCGGCTTCA CGCTGCTGTC GCGCGTGACC
GGACTGGCCC GTGAGACGCT GATCGCCCGC GCGTTCGGCG CCAGTCAATT CACCGACGCG
TTCTACGTCG CATTCCGTAT TCCGAACCTG CTGCGCCGGC TGTCCGCCGA AGGGGCGTTT
TCGCAGGCGT TCGTGCCGAT TCTCGCCGAG TTCAAGAATC AAAAAGGGCA CGATGCGACG
AAGGCGCTGG TCGACGCGAT GTCGACCGTG CTCGCGTGGG CGCTCGCGCT CCTGTCGCTC
GCGGGGATCG CCGGCGCGTC GTGGGTGGTG TTCGCGGTCG CGTCGGGGCT GCGCACGGAC
GGCCAGGCGT TCCCGCTCGC CGTCGCGATG ACGCGGATCA TGTTCCCGTA CATCGTGTTC
ATTTCGCTCA CCACGCTCGC GTCGGGCGTG CTCAACACGT ACAAGCGTTT CTCGCTGCCG
GCGTTCGCGC CCGTGCTGCT GAACGTCGCG TTCATCGTCG CGGCGGTGTT CGTCGCGCCG
CACCTGAAGG TGCCCGTCTA TGCGCTCGCA TGGGCGGTGA TCGCGGGCGG CGCGCTGCAG
TTCGCGGTGC AGTTGCCGGG GCTGAAGAAG ATCGACATGA TGCCCGCGAT CGGCGTGAAT
CCGCTGCGCG CGCTCGCGCA CCCGGGCGTG AAGCGTGTGC TGGCGAAGAT GGTGCCCGCG
ACGTTCGCGG TGTCGGTCGC GCAACTGTCG CTCATCATCA ATACGAACAT CGCGTCGCGG
CTCGGGCAGG GCGCCGTGTC GTGGATCAAT TACGCGGACC GGCTGATGGA GTTTCCGACC
GCGCTCCTCG GCGTCGCGCT CGGCACGATC CTGCTGCCGA GCCTGTCGAA GGCGCACGTC
GACGCCGATT CGACCGAGTA TTCGGCGCTC CTCGACTGGG GCCTGCGGGT CACGTTCCTG
CTCGCGGCGC CGAGCGCGCT CGCGCTGTTC TTCTTCGCCG AGCCGCTCAC GGCGACGCTG
TTCAATTACG GCAAATTCGA CGCGCACACG GTCACGATGG TCGCGCGCGC GCTCGCGACG
TACGGGATCG GCCTCGTCGG CATCATCCTC ATCAAGATCC TCGCACCCGG CTTCTATGCG
AAGCAGGACA TCAAGACGCC CGTGAAGATC GCGATCGGCG TGCTCGTCGT CACGCAGTTG
TCGAACTACG TGTTCGTGCC GATCATCGGC CACGCGGGGC TCACACTGAG CATCGGCGTG
GGCGCGTGCC TGAACTCGCT GCTGCTCTTC ATCGGGCTGC GCCGCCGCGG CATCTATCAG
CCGTCGTCCG GCTGGCTGCG CTTTTTCGCG CAGCTCGCGG GCGCCTCGCT CGTGCTCGCC
GGCGTGATGC ACTGGCTCGC GATCAACTTC GACTGGACCG CGATGCGCGC GGCGCCGCTC
GAGCGGATCG CGCTGATGGC CGCCTGCCTC GTTCTGTTCG CTGCACTATA TTTCGGTATG
TTGTGGCTGA TGGGTTTCAA ATACGCGTAC TTCAGACGGC GCGCCAAGTA A
|
|---|
| Protein sequence | MNLFRALLTV SGFTLLSRVT GLARETLIAR AFGASQFTDA FYVAFRIPNL LRRLSAEGAF
SQAFVPILAE FKNQKGHDAT KALVDAMSTV LAWALALLSL AGIAGASWVV FAVASGLRTD
GQAFPLAVAM TRIMFPYIVF ISLTTLASGV LNTYKRFSLP AFAPVLLNVA FIVAAVFVAP
HLKVPVYALA WAVIAGGALQ FAVQLPGLKK IDMMPAIGVN PLRALAHPGV KRVLAKMVPA
TFAVSVAQLS LIINTNIASR LGQGAVSWIN YADRLMEFPT ALLGVALGTI LLPSLSKAHV
DADSTEYSAL LDWGLRVTFL LAAPSALALF FFAEPLTATL FNYGKFDAHT VTMVARALAT
YGIGLVGIIL IKILAPGFYA KQDIKTPVKI AIGVLVVTQL SNYVFVPIIG HAGLTLSIGV
GACLNSLLLF IGLRRRGIYQ PSSGWLRFFA QLAGASLVLA GVMHWLAINF DWTAMRAAPL
ERIALMAACL VLFAALYFGM LWLMGFKYAY FRRRAK
|
|---|
| |