Gene BURPS668_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0907 
Symbol 
ID4881750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp886779 
End bp888335 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content69% 
IMG OID640126835 
Productputative N-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001057958 
Protein GI126442238 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGAA AGATGTTGAT CAAACCGTTC CGCTCGATCG AATCGGCGGC CACCGCGACC 
CATAACTGGC GGCGCCGGCA GATCCTGCGC GCCGGCGCGT CGACGCTCGT GCTCGGGCTC
GCGCTGCCGC GTCTCGCGCA CGCGAGCTCG GTGCTCGGCG TGCGCGTGTG GCCCGCGCGC
GACTACACGC GCGTGACGAT CGAATCGGAT CAGCCGCTGC AGAACACCCA GCAACTGCTG
CAGGGGCCGG ACCGGCTCGT CGTCGATCTG AACGGCCTCG AGCTCGACCA GGCGCTGCGC
GACCTCGTCT CGAAGATCGC GCCGAACGAT CCGCAGATCC AGTCGGTGCG CGTCGGCCAG
TATCAGCCGC ACGTGGTGCG GATGGTGTTC GACCTGAAGG GCTCGGTGAA GCCGCAGGTG
TTCACGCTGC CGCCCGTCGG CACCTACAAG TACCGGCTCG TGTTCGACCT GTATCCGGCC
GTCGCCCCCG ATCCGCTGTC CGATCTGATC GCGCAGACGG AGCGCAAGGA ACAGCAGTTG
AATGACACGC TGCGCGCGCA GCAGGCGCAG CCGCCCACGG CCGCGCTCAA CGGCCCGACC
GCCGCGCCGC CCGCCGCGAC GGACAACAGC GATGCGTTCT TCCAGCGCTT CGCGCAGAAC
AACCCGCCGG CCGCGCATTC GGCGCGGCCG GCGCCCGCCA ATCCGCCCGT CGCGCAAGCG
AGCCCGCCCG CCGCACCGCC GCGGCCCGCG GTCAAGCCGC CGCCCGTCAT CGCGCGCAGG
AACGACGACG ATTCGGGCGA CACCGACACC TACGCGTTCA CCGCGCCGAA ATCCGGCCGC
GGCACCGTGC GCCTGCTGAC GGTGGCGATC GATCCGGGCC ACGGCGGCGA GGATCCGGGC
GCGATCGGCG GCGGCGGCAC GTACGAAAAG CACATCGCGC TCGACATCGC GAAGAAGCTG
CGCGCGAAGA TCGACGCCGC GCCGAACATG CGCGCGATGA TGACGCGCGA CGCCGATTTC
TTCGTGCCGC TGAACGTGCG CGTGCAGAAG GCGCGGCGCG TCGGCGCGGA TCTGTTCGTG
TCGATCCACG CGGATGCGTT CACGACGCCG TCGGCACGCG GCTCGTCGGT GTTCGCGCTG
TCGGACCACG GCGCGTCGAG CGCGGCCGCG CGCTGGCTCG CGAACAAGGA GAACTCCTCC
GATCTGATCG GCGGGATCAA CATCAAGACG CAGGACGTCG CGGTGAACCG CGCGCTGTTC
GATATGTCGA CGACCGCGCA GATCCGCGAT TCGCTGCGCT ACGGCAACTA CGTGCTGCGC
GAAGTCGGCG GCATCAACAA GCTGCACAAG GGCTCGGTCG AGCAGGCGGG GTTCGCGGTG
CTCAAGGCGC CCGATATTCC GTCGATCCTC GTCGAGACCG CGTTCATCAG CAATCCGGAC
GAAGAGCGGC GCCTGAACGA CGACGCGTAT CGCGACCAGA TGGCCGATGC GATCTTCCGC
GGAATCAAGC GCTATTTCTC GGCGAACCCG CCGCTCGCGA AGAGCCGGAT GACGTAA
 
Protein sequence
MSRKMLIKPF RSIESAATAT HNWRRRQILR AGASTLVLGL ALPRLAHASS VLGVRVWPAR 
DYTRVTIESD QPLQNTQQLL QGPDRLVVDL NGLELDQALR DLVSKIAPND PQIQSVRVGQ
YQPHVVRMVF DLKGSVKPQV FTLPPVGTYK YRLVFDLYPA VAPDPLSDLI AQTERKEQQL
NDTLRAQQAQ PPTAALNGPT AAPPAATDNS DAFFQRFAQN NPPAAHSARP APANPPVAQA
SPPAAPPRPA VKPPPVIARR NDDDSGDTDT YAFTAPKSGR GTVRLLTVAI DPGHGGEDPG
AIGGGGTYEK HIALDIAKKL RAKIDAAPNM RAMMTRDADF FVPLNVRVQK ARRVGADLFV
SIHADAFTTP SARGSSVFAL SDHGASSAAA RWLANKENSS DLIGGINIKT QDVAVNRALF
DMSTTAQIRD SLRYGNYVLR EVGGINKLHK GSVEQAGFAV LKAPDIPSIL VETAFISNPD
EERRLNDDAY RDQMADAIFR GIKRYFSANP PLAKSRMT