Gene BURPS668_0816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0816 
Symbol 
ID4883996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp797237 
End bp797755 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content73% 
IMG OID640126744 
Productputative type IV pilin protein PilA 
Protein accessionYP_001057867 
Protein GI284159924 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCGCTC GCGGTTTCAC GCTGATCGAA TTGATGATCG TGCTCGCGAT CGTCGGCGTC 
GTCGCCGCGT ACGCGATTCC CGCCTATCAG GATTACCTCG CGCGCAGCCG GGTCGGCGAG
GGGCTCGCGC TCGCCGCGTC CGCGCGGCTC GCGGTTGCCG AGAACGCGGC GAGCGGCAAT
GGATTCTCGG GCGGCTACGT GTCGCCGCCC GCCACGCGCA ACGTCGATTC GATCCGGGTC
GACGACGACT CCGGGCAGAT CGTCGTCGCG TTCACGACGC GCGTGGCGGC GGCGGGCGCG
AATACGCTCG TGCTGGTGCC GTCCGCGCCG GATCAGGCGG ATACGCCGAC GGCGCGTGTC
GCGTTGTCGA AGGGCGCCGT CCAGGCGGGG GCGATCACGT GGGAATGCTT TGCCGACGGC
AAGGCGTCGT CGTCGCTGCC CGCGCCGGGC GCCGGCCCGC TGCCGACCGA TGCGCCGACG
CTGGCCGGCA AGCTGGCGCC CCCCGAGTGC CGCGCGTGA
 
Protein sequence
MRARGFTLIE LMIVLAIVGV VAAYAIPAYQ DYLARSRVGE GLALAASARL AVAENAASGN 
GFSGGYVSPP ATRNVDSIRV DDDSGQIVVA FTTRVAAAGA NTLVLVPSAP DQADTPTARV
ALSKGAVQAG AITWECFADG KASSSLPAPG AGPLPTDAPT LAGKLAPPEC RA