Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0816 |
Symbol | |
ID | 4883996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 797237 |
End bp | 797755 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640126744 |
Product | putative type IV pilin protein PilA |
Protein accession | YP_001057867 |
Protein GI | 284159924 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCGCTC GCGGTTTCAC GCTGATCGAA TTGATGATCG TGCTCGCGAT CGTCGGCGTC GTCGCCGCGT ACGCGATTCC CGCCTATCAG GATTACCTCG CGCGCAGCCG GGTCGGCGAG GGGCTCGCGC TCGCCGCGTC CGCGCGGCTC GCGGTTGCCG AGAACGCGGC GAGCGGCAAT GGATTCTCGG GCGGCTACGT GTCGCCGCCC GCCACGCGCA ACGTCGATTC GATCCGGGTC GACGACGACT CCGGGCAGAT CGTCGTCGCG TTCACGACGC GCGTGGCGGC GGCGGGCGCG AATACGCTCG TGCTGGTGCC GTCCGCGCCG GATCAGGCGG ATACGCCGAC GGCGCGTGTC GCGTTGTCGA AGGGCGCCGT CCAGGCGGGG GCGATCACGT GGGAATGCTT TGCCGACGGC AAGGCGTCGT CGTCGCTGCC CGCGCCGGGC GCCGGCCCGC TGCCGACCGA TGCGCCGACG CTGGCCGGCA AGCTGGCGCC CCCCGAGTGC CGCGCGTGA
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Protein sequence | MRARGFTLIE LMIVLAIVGV VAAYAIPAYQ DYLARSRVGE GLALAASARL AVAENAASGN GFSGGYVSPP ATRNVDSIRV DDDSGQIVVA FTTRVAAAGA NTLVLVPSAP DQADTPTARV ALSKGAVQAG AITWECFADG KASSSLPAPG AGPLPTDAPT LAGKLAPPEC RA
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