Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0777 |
Symbol | |
ID | 4884412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | - |
Start bp | 759060 |
End bp | 760877 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640126705 |
Product | hypothetical protein |
Protein accession | YP_001057829 |
Protein GI | 126439425 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACC TCCTTCCCCA CTACGAACGC GAGATCGCGC TGCTGCGGCG CTCGATGCGC GAGTTCGCGC GCCGCCACCC GAAAATCGCG ACGCGCCTGG GCATCGCCGA CGGCCAGGCC GACGACATGC ACGTGGAACG CCTGATCCAG TCGTTCGCGC TCGTCGGCGC GCAGATCGGC GCGGCGCTCG ACGACGAATA TCCGGAGTTC ACCGAGGCGC TCGTCGAAAC CGTGTGCCCC GACTATCTGC GCCCGTTTCC CGCGTGCTCG ATCGCGCAGT TCGACGCGCC GCCGCTGTTC GGCCAGCCGG CGGAGGGCGT GACGATCGCG CGCGGCACCA CGCTCGAGAG CCGGATCGGC GCGAATCGGT TCCGCACCGC CTACGACGTC ACGCTCGCGC CCGTGTCGAT CGTCGACGCG CGCTTTCGGC CGGCGTCGGC CGCGCCGTCC GCCGCGCGGA TGCCGCCGCA ATCGACGGGC ATCGTGTCGA TCACCTTCGA TGCGCTGACC GCGCAGCCGG TGCTCGCGGC GCTGCGCGCG CGCGGCCTGC GCGTGCATCT GCACGGCGAC GCGCCGCTCG TCGCCGCGCT CGCCGACACG CTCGCGATGC GCGCGCCGGC CGCGTTCATC GAGCTCGACG GCGACGGGCG CTGGAAACCA CTGTCGAAGG TGCCGCTCGC GCGCGTCGGC TTCGCCGATG CGCACGCGCT GCTCGATCCC GCGCCCGGCG CGGCGCCGTT CCGGCTGCTG ATGGAATATT TCGCATTCCC GGCGAAATTC GATTTCGTCG ACATCGACGT CGCGCGCATC GCGCGCGCGG CGGGCCCGTG CCGGCGCCTG TCGCTGCACT TGCCCGTCGT CGACGTCGCG ATGGCGTCGC AGCACGCGCG CGCGCTCGAC ACGCTCGGCG CGTCGAACCT GCGGCTGTTC TGCACGCCGA TCGTCAATCT GTTCAGCCAG GACGCGATGC CGATCTCGCT GCGCGACGCC GAGGCCGTGT ATCCCGTCAC GCCGCAGGCG CTGAAATCGA ACGGCATCGA GGTGAGGTCG ATCGACGCGG TGCGCATCGC GCGCGAGGGC GAGCCCGGCG CGAGCCTCGA CGTGACGCCG TACCGCTCGC TGCTGCACGG CCGGCACGGC GGCCGCGACG CGCCCGTCTA CTGGGTCGCG CAGCGCGAGC GCTTCGCGCC CGGCTCGCAA CCCGCGGCGC TGCGGCTCGT CGACGCCGAC GGCGCGAACG CGCGGCTGGG CGCCGATCAG CTGAACGTCG AGCTGACCTG CACGAACGGC GACTATCCGC AGACGCTGCC GATCGGCGAG CCGGACGGCG ATCTGCTCAA CGAGAAGGAC AATCTGCCGG GCCGGATCGC GCTCCTGCGC CGGCCGACGC CCGCCCGCCG GTTCGCGCGC GAGCACGGCG CGCTGTGGCG CATGATCGCG GCGATGACCC CGCACGCGCT GCTGTTGCAG CCGTCGGGGC TCGGCGCGCT GAAGGCGCTG CTCGTTCAGC ACGCCGCGCG CGCGTCGAGC GCGGCGCCGC AGATCGACGC GATCGCGAAT CTCGACCACA AGGTCGCCGT GCGCTGGATG GCGGTGAAGC CGATGCCGAC CTTCGTGCGC GGCATCGAAA TCGCGCTGAC GCTGAACGAG GCCGCATTCG TCACGAGCGG CCTGAAGACG TTCATCGACG TGATGGACGG TTTCTTCGCG CTGCATGCGC CGCCGAACGG CTTCGTGCAG CTCGTCGCGT ACTCGCGCGA CACGGGCCGC GAGCTGCATC GGTGCGCGCC GCGCGGCGCG ATCGCGCAGC TCGTGTAG
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Protein sequence | MNDLLPHYER EIALLRRSMR EFARRHPKIA TRLGIADGQA DDMHVERLIQ SFALVGAQIG AALDDEYPEF TEALVETVCP DYLRPFPACS IAQFDAPPLF GQPAEGVTIA RGTTLESRIG ANRFRTAYDV TLAPVSIVDA RFRPASAAPS AARMPPQSTG IVSITFDALT AQPVLAALRA RGLRVHLHGD APLVAALADT LAMRAPAAFI ELDGDGRWKP LSKVPLARVG FADAHALLDP APGAAPFRLL MEYFAFPAKF DFVDIDVARI ARAAGPCRRL SLHLPVVDVA MASQHARALD TLGASNLRLF CTPIVNLFSQ DAMPISLRDA EAVYPVTPQA LKSNGIEVRS IDAVRIAREG EPGASLDVTP YRSLLHGRHG GRDAPVYWVA QRERFAPGSQ PAALRLVDAD GANARLGADQ LNVELTCTNG DYPQTLPIGE PDGDLLNEKD NLPGRIALLR RPTPARRFAR EHGALWRMIA AMTPHALLLQ PSGLGALKAL LVQHAARASS AAPQIDAIAN LDHKVAVRWM AVKPMPTFVR GIEIALTLNE AAFVTSGLKT FIDVMDGFFA LHAPPNGFVQ LVAYSRDTGR ELHRCAPRGA IAQLV
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