| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0585 |
|---|
| Symbol | |
|---|
| ID | 4883056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 554197 |
|---|
| End bp | 554736 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640126513 |
|---|
| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
|---|
| Protein accession | YP_001057637 |
|---|
| Protein GI | 126438830 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGC CCCCTGCCAC GGCGGCCGAA CGCGCGAGCC GCGTGAAGCT GATGATTTTC
GACGTCGACG GCGTGCTGAC CGACGGCGGC CTCCATTTCA CCGCGGCGGG CGACGCGATG
AAGTCGTTCA ACACGCTCGA CGGCCACGGC GTGAAGCTCC TCGGCGAAGC GGGCATCGCG
ACCGCGATCA TCACCGGCCG CCGCTCGGAG GCGCTCGCCG CGCGCGCGAA GGAAATGCGC
ATCGCGCACC TGCACGAGGG CGTCGAGAAC AAGCTCGCCG TGTTCGGCGA ACTGCTGCGC
GCGCTCGGCC TCGAGCCCGG CGAGTGCGGC TACATGGGCG ACGACTGGCC CGACCTCGCG
GTGATGCTGC GTTGCGGCTT CGCGGCCGCG CCGGCGAACG CGCATCCGGA CGTGATCGCG
CGCGCGCATT GGGTCGCCGA GGCCCGCGGC GGTCACGGCG CGGTGCGCGA AGTGTGCGAT
GCGATCCTGC GCGCGCAGCA CCGCTACGAC GCGCTGCTCG CGGCCGCCTG CGGAGCCTGA
|
|---|
| Protein sequence | MSAPPATAAE RASRVKLMIF DVDGVLTDGG LHFTAAGDAM KSFNTLDGHG VKLLGEAGIA
TAIITGRRSE ALAARAKEMR IAHLHEGVEN KLAVFGELLR ALGLEPGECG YMGDDWPDLA
VMLRCGFAAA PANAHPDVIA RAHWVAEARG GHGAVREVCD AILRAQHRYD ALLAAACGA
|
|---|
| |