Gene BURPS668_0579 details

Gene Information

• Locus tag: BURPS668_0579
• Symbol: ptsN
• ID: 4883106
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 549192
• End bp: 549647
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640126507
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_001057631
• Protein GI: 126439304
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCGCC TAGCCAAAAT CCTGCCTTTG GAGAACGTCG TCATCGACCT CTCCGTCACC 
AGCAAGAAAC GCGTCTTCGA ACAGGCCGGC CTGATCTTCG AGAATCAGAA CGGCATCGCG 
CGCAGCACCG TCACCGATAA TCTGTTCGCA CGCGAACGTC TCGGTTCGAC GGGCCTCGGC 
GAGGGCGTCG CCATTCCGCA CGGCCGGATC AAGGGGCTCA AGCATCCGCT CGCCGCCTTC 
GTGCGGCTCG CCGAGCCGAT TCCGTTCGAG GCGCCCGACG GCCAGCCCGT GTCGCTGCTG 
ATCTTCCTGC TCGTGCCCGA GCAGGCGACG CAGGCGCACC TCGAAATCCT TTCCGAAATT 
GCCCAGCTGC TGTCCGATCG CGACACGCGC GAGCGTCTGC ACACCGAACC GGACCGCGAC 
GAGTTGCATC GACTCCTGAC TCAGTGGCAA CCTTAG 

 

Protein sequence

MNRLAKILPL ENVVIDLSVT SKKRVFEQAG LIFENQNGIA RSTVTDNLFA RERLGSTGLG 
EGVAIPHGRI KGLKHPLAAF VRLAEPIPFE APDGQPVSLL IFLLVPEQAT QAHLEILSEI 
AQLLSDRDTR ERLHTEPDRD ELHRLLTQWQ P