Gene BURPS668_0568 details

Gene Information

• Locus tag: BURPS668_0568
• Symbol: rplY
• ID: 4883070
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 668
• Kingdom: Bacteria
• Replicon accession: NC_009074
• Strand: -
• Start bp: 538781
• End bp: 539395
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640126496
• Product: 50S ribosomal protein L25/general stress protein Ctc
• Protein accession: YP_001057621
• Protein GI: 126439855
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1825] Ribosomal protein L25 (general stress protein Ctc)
• TIGRFAM ID: [TIGR00731] ribosomal protein L25, Ctc-form

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0836133
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTCG TCGCTTTCGA GCGCCAACAG CAAGGTACGG GTGCGAGCCG CCGCCTGCGC 
AACGCCGGTA AGACCACGGG TATCGTGTAC GGTGGCGAAG TCGCCCCGCA AATGATCGAA 
CTCGATCACA ACGCGCTGTG GCACGCGCTG AAGAAGGAAG CCTTCCACTC GTCGATCCTC 
GATCTCGAGG TGGCCGGCAA GTCGCAACGC GTGCTGCTGC GTGACGTGCA ATACCATCCG 
TTCCGCCAGC TCGTGCTGCA CGTGGACTTC CAGCGCATCG ACCCGAAGAA GAAGCTGCAC 
ACGAAGGCGC CGCTGCACTT CCTGAACGCG GAAACGAGCC CGGCCGTGAA GCTGTCGAGC 
GCGGTCGTGT CGCACGTCGT GACGGAAATC GAAATCGAGT GCCTGCCGGC CGACCTGCCG 
GAATTCCTCG AAGTCGATCT GTCGAAAATC GAAGCAGGCC AGTCGCTGCA CGCGAAGGAC 
ATCGCGCTGC CCAACGGCGT CGCGCTGACC GCGCACGTCG ACGCAGAAAA CCCGGTGATC 
GCCTCGGCGA CGATTCCGGC CGGCGCCGTG TCGGATGAAG CGGCTGCGGG CGAAGGCGAA 
ACGCCGGCGG CCTAA 

 

Protein sequence

MKVVAFERQQ QGTGASRRLR NAGKTTGIVY GGEVAPQMIE LDHNALWHAL KKEAFHSSIL 
DLEVAGKSQR VLLRDVQYHP FRQLVLHVDF QRIDPKKKLH TKAPLHFLNA ETSPAVKLSS 
AVVSHVVTEI EIECLPADLP EFLEVDLSKI EAGQSLHAKD IALPNGVALT AHVDAENPVI 
ASATIPAGAV SDEAAAGEGE TPAA