| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0563 |
|---|
| Symbol | |
|---|
| ID | 4884879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | + |
|---|
| Start bp | 535089 |
|---|
| End bp | 535793 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640126491 |
|---|
| Product | putative methyltransferase |
|---|
| Protein accession | YP_001057616 |
|---|
| Protein GI | 126441614 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0742] N6-adenine-specific methylase |
|---|
| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00400305 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGTCA TCGCGGTGCC TCGCGCCGTT TCAGCCGGTT CATTCCGTTT CCAACGCTTC
CGTATTGAAT TCTTTCGTAT GTCCCGTTCT TCTCCGGCGC GGCCGCAGGC GCAGCGAGCC
CCGGCCGCTG GCCGCGGCAA GCCGCACACG ATCCGCATCA TCGGCGGCGA CTGGAAGCGC
ACGCCGCTTC CGGTGCTCGA TCTGGACGGC TTGCGCCCGA CCCCCGATCG CGTGCGCGAG
ACGCTTTTCA ACTGGCTCGG CCAGGCTCTC GAAGGGCGGC GCTGCCTCGA TCTGTTCGCG
GGCAGCGGCG CGCTCGGCTT CGAGGCGGCG TCGCGCGGCG CGGCGAGCGT CGTGATGGTC
GAGCGCCATC CGCGCGCCGC GCAGCAACTG CGCGCGCTGA AGGACAAGCT CGCCGCCCGC
GCGATCGAGA TCGCGGAGGC CGATGCGCTG CGCATCGCGG CGGGCCTCGC GCCGCGCTCG
TTCGACGTCG TGTTCGTCGA CCCGCCGTTC GGCGACGCGG CCGTGTTCGC GCGCGCGCTC
GATCTCGCGC CGAATCTCGT CGCGCCGGAC GGTTTTCTGT ACGTCGAGAC GGGCGCGCCG
CTCGATCCGT CCGCGCACGC GTCGCTCGCC GGCTGGCAGG TGGCGCGGCG CGGCAAGGCG
GGCGCCGTCC ACTATCATTT GCTGCAACGC GAAAATGATG AATAA
|
|---|
| Protein sequence | MRVIAVPRAV SAGSFRFQRF RIEFFRMSRS SPARPQAQRA PAAGRGKPHT IRIIGGDWKR
TPLPVLDLDG LRPTPDRVRE TLFNWLGQAL EGRRCLDLFA GSGALGFEAA SRGAASVVMV
ERHPRAAQQL RALKDKLAAR AIEIAEADAL RIAAGLAPRS FDVVFVDPPF GDAAVFARAL
DLAPNLVAPD GFLYVETGAP LDPSAHASLA GWQVARRGKA GAVHYHLLQR ENDE
|
|---|
| |