| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0547 |
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| Symbol | rpoH |
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| ID | 4884666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 668 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009074 |
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| Strand | - |
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| Start bp | 519518 |
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| End bp | 520453 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640126475 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001057600 |
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| Protein GI | 126441976 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.118318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAACG CATTGACCCT TCCGAACACA CTGCGCCCGG CGTCCGCTAA GGCCGTATCG
GCGGGCTCGC TGACGCTCGC CTCTCATTCG ATGCTGCCCG GCCATCTGGG CAACATCGAC
GCCTATATCC AGGCTGTGAA CCGGATTCCG CTGCTAAGCG CGGAGGAAGA GCGTCAATAC
GCGACCGAAT ACCGCGAGCA AAACAATCTC GACGCCGCGC GCCGGCTCGT GCTGTCGCAC
CTGCGGCTCG TCGTGTCGGT CGCGCGCAAC TACCTCGGCT ACGGCCTGCC GCACGGCGAT
CTGATCCAGG AAGGCAACAT CGGCCTGATG AAGGCGGTCA AGCGGTTCGA TCCCGCCCAG
AACGTGCGCC TCGTGTCGTA CGCGATCCAC TGGATCAAGG CCGAGATTCA CGAGTACATC
CTGCGCAACT GGCGCATGGT CAAGGTGGCG ACGACGAAGG CGCAGCGCAA GCTGTTCTTC
AATCTGCGCA GCCACAAGAA GGGCACGCAG GCGTTCACGC CGGAGGAAAT CGACGGCCTC
GCGCAGGAGC TGAACGTCAA GCGCGAGGAA GTGGCCGAGA TGGAAACCCG CCTGTCGGGC
GGCGACATCG CGCTCGAAGG CCAGATCGAC GACGGCGAGG AATCGTACGC GCCGATCGCC
TATCTCGCCG ATTCGCACAA CGAGCCGACC GCCGTGCTCG CCGCGCGGCA GCGCGACATG
CTGCAGACGG ACGGCATCGC GCGCGCGCTC GAATCGCTCG ACGCGCGCAG CCGCCGGATC
ATCGAGGCGC GCTGGCTGAA CGTCGACGAC GACGGCTCGG GCGGCTCGAC GCTGCACGAT
CTCGCGGCCG AATTCGGCGT GTCGGCGGAG CGCATCCGCC AGATCGAGGC AAGCGCGATG
AAGAAGATGC GCACGGCGCT CGCCGCGTAC GCATAA
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| Protein sequence | MSNALTLPNT LRPASAKAVS AGSLTLASHS MLPGHLGNID AYIQAVNRIP LLSAEEERQY
ATEYREQNNL DAARRLVLSH LRLVVSVARN YLGYGLPHGD LIQEGNIGLM KAVKRFDPAQ
NVRLVSYAIH WIKAEIHEYI LRNWRMVKVA TTKAQRKLFF NLRSHKKGTQ AFTPEEIDGL
AQELNVKREE VAEMETRLSG GDIALEGQID DGEESYAPIA YLADSHNEPT AVLAARQRDM
LQTDGIARAL ESLDARSRRI IEARWLNVDD DGSGGSTLHD LAAEFGVSAE RIRQIEASAM
KKMRTALAAY A
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