| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0531 |
|---|
| Symbol | |
|---|
| ID | 4883312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 499999 |
|---|
| End bp | 501906 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640126459 |
|---|
| Product | AMP-binding domain-containing protein |
|---|
| Protein accession | YP_001057584 |
|---|
| Protein GI | 126441177 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.612015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTCT CAAATGAAAT TCGGGCTCTG AACCTTCGTT TACTGTATGG AAATTGTCAG
GCAAGCACGC TTATTGGACG AACAATCCTG ATTAATTATT GCGAATCGAG TTTTAGCGAC
TTTTTAATAA AGGGGCAGTC AATGCGTGAT TCCTCGCCGC TGATCGAAAG GCTGTTGGCT
CCGCTCGCAG AGGGTCGGAA CTGCCGCGCG CACGGCGTCG GCACGCTCGA CGAAAGCGGC
ATCGAGCGCG TGCTGTCCTA CCGGCAACTG AGCGAAGCGG GCCTGCGCAT GAGCGCCGCG
CTGAACGCGC TCGGCGCGCG CGCGGGCGAC CTCGCCCTCG TCGCGCTGCC CGCGACGGGC
GACTATCTCG CGCTCCTCGT CGGCTGCGTG CTGTCGGGCG TCGTGCCGTG CACGGTGCCG
CCGCCGCTCA AGCGCGCGAG CGGCTCGAGC CCGCAGGTGC TCGAAGTCGC GTGCCGGCTC
TATCGCCCGC GGTTCGTGTT CACGGCGTCC GCGCACGTCG CCGAGCTCGA GGCGCAACTG
CGCGACACGG GCGCGCGCGT GATCGACGTC GGCATCCTGC ACGCGGCGTC GACGGGCGCC
GAGCCGCGGC TCGCGCTGCG CGGCGCCGGC GACACGCATC ACATCCAGCT GACGTCCGGC
TCCACCTCGC ATCCGAAGGC GGCCGTCATC AGCCATCGCA ACGTCGCGGC CAACATCGCC
GGCATCGCGA ACGCGTGCGG CTACAGCAAG CACGCCGCCG ACAACACCGT GATCTGGCTG
CCGCTGCATC ACGACATGGG CCTCGTCAGC CTGCTGCTGC ATCTGTATTA CAGGACGTCG
CTGCGGCTGA TGCCTTCGAT GAGCTTCGTG CGCAATCCGC TCGGCTGGCT CAGGCGCATC
GCGCACGCGC GCTCGACCAT CGCCGTCGCG CCCACCTTCG CGCTGCGCTA CTGCGTGCGC
CGCTTCAACG CGGCGACGAT GGACGGCGCG GACTTCAGCC ATCTGCGCAC GTTCCTCGTC
GGCGCGGAGC GGGTCGATCG CGCGACGCTG TCCGATTTCG CGTCGACGTT CGCGCCGTAC
GGCTTTCACG CATCGGCGCT GCAGCCGTGC TACGGAATGG CGGAGGCAAC GCTCGCCGTC
ACGCTGCACC GCTCGTTCGA CACGCCGAAC GCGCCGGCGT TCACGCACGT GATCGCCGAT
CGCATCGACA CCGCGACGCT CGCGCGGCAC CGCCGCGCCG CCCCCGCGCC CGATGGCCAC
ACGGGCGCGA CCGACACGCT GCTCGCCGTC GGCGCGCCGC TCGACGACAT GGCCTACGAG
ATCCGCGACG CGCAGGGCCG GCTCGCCGCC GAGCGCGAAG CGGGTGAAAT CTTCATTCGC
GGCGCATCGG TGATGCAGGG CTATCTGCCG AGCGCCGGCG CGCCCGCGCC GCAGCCGTTC
GACGCGCACG GCTGGTTCGC GACGGGCGAC ATCGGCTACG TGAGCGGCGG CCAGCTCTTC
ATCCTCGGGC GCAAGAAGGA AATCATCATC ATCCGCGGCA CGAACTACTT TCCGCACGAG
ATCGAGGAGA CGATCGACAG CCATCCGGCC GTCTACAAAG GCGCCTGCAT CGCGGTGGGC
ATTCACGACG AGACGCAGGG CACCGAGAAC CTCGTCGTCC TCGTCGAGGC GCACGCGAAT
CACGTGAGCC GCGATTCGCG CGCCGAGTTG CAGGCGCGCA TGCAGCAGCG GCTCGGCTAC
TGCGCGCAGC GCATCGCGTT CGTCGAGCCG GGCGCGCTGC CGCGCACGAC GAGCGGCAAA
CCGCAACGGC TGAAGGCGCG CGCGATGTTC GTGAGCGGCG AGCTGCGCGA GATCGCGCTG
CCGCCGTCGC GCCGCGCCGA TGCCGATCGC GTCGCGCCGT ACCCGTGA
|
|---|
| Protein sequence | MHVSNEIRAL NLRLLYGNCQ ASTLIGRTIL INYCESSFSD FLIKGQSMRD SSPLIERLLA
PLAEGRNCRA HGVGTLDESG IERVLSYRQL SEAGLRMSAA LNALGARAGD LALVALPATG
DYLALLVGCV LSGVVPCTVP PPLKRASGSS PQVLEVACRL YRPRFVFTAS AHVAELEAQL
RDTGARVIDV GILHAASTGA EPRLALRGAG DTHHIQLTSG STSHPKAAVI SHRNVAANIA
GIANACGYSK HAADNTVIWL PLHHDMGLVS LLLHLYYRTS LRLMPSMSFV RNPLGWLRRI
AHARSTIAVA PTFALRYCVR RFNAATMDGA DFSHLRTFLV GAERVDRATL SDFASTFAPY
GFHASALQPC YGMAEATLAV TLHRSFDTPN APAFTHVIAD RIDTATLARH RRAAPAPDGH
TGATDTLLAV GAPLDDMAYE IRDAQGRLAA EREAGEIFIR GASVMQGYLP SAGAPAPQPF
DAHGWFATGD IGYVSGGQLF ILGRKKEIII IRGTNYFPHE IEETIDSHPA VYKGACIAVG
IHDETQGTEN LVVLVEAHAN HVSRDSRAEL QARMQQRLGY CAQRIAFVEP GALPRTTSGK
PQRLKARAMF VSGELREIAL PPSRRADADR VAPYP
|
|---|
| |