Gene BURPS668_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0458 
SymboldctD 
ID4883868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp430952 
End bp432307 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content70% 
IMG OID640126386 
ProductC4-dicarboxylate transport transcriptional response regulator DctD 
Protein accessionYP_001057511 
Protein GI126438903 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAACC GCCTGCAAGT GATCTACATC GAAGACGACG AGCTCGTGCG CCGCGCGAGC 
GTGCAAAGCC TGCAGCTCGC GGGGTTCGAC GTCGTCGGGT TCGGTTCGGT GGAGGCGGCC
GAGAAGGCGA TCGTCGGCGA CGCGACCGGC GTGATCGTAT CGGACATTCG CCTGCCCGGC
GCGAGCGGCC TCGAGCTGCT CGCGCAATGC CGCGAGCGTA CGCCCGACGT GCCCGTCGTG
CTCGTCACCG GGCACGGCGA CATTTCGATG GCCGTGCAGG CGATGCGCGA CGGCGCCTAC
GACTTCATCG AAAAGCCGTT CGCCGCCGAG CGGCTGACCG AAACGGTGCG GCGCGCGCTG
GAGCGGCGCG CGCTCGTGCT CGAGAATCAC GCGCTGCGGC GCGAACTCGC CGGGCAGGGC
GTCGTCGCGC CGCGGATCAT CGGCCGCAGC CCGGCGATCG AGCAGGTGCG GCGGCTGATC
GCGAATGTCG CGCCCACCGA CGCGTCGGTG CTGATCAACG GCGACACCGG CGCCGGCAAG
GAACTGATCG CGCGCAGCCT GCACGAGTTG TCGCCGCGCC GCGACAAGCC GTTCATCGCG
GTCAACTGCG GCGCGCTGCC GGAGCCGATG TTCGAATCCG AGATGTTCGG CTACGAGCCG
GGCGCGTTCA CCGGCGCGGC GAAGCGCCGT ATCGGCAAGC TCGAATATGC GTCAGGCGGT
ACGCTGTTCC TCGACGAGAT CGAAAGCATG CCGCTTGCGC TGCAGGTCAA GCTGCTGCGC
GTGCTGCAGG ACGGCGTGCT CGAGCGGCTC GGCTCGAATC AGCCGATTCG CGTGAATTGC
CGCGTGGTCG CGGCGGCGAA GGGCGACATG AGCGAGCACG TCGCGGCCGG CACGTTCCGG
CGCGACCTGC TGTATCGGCT GAACGTCGTG ACGATCGCGC TGCCGCCGCT CGCCGAGCGC
CGCGAGGACA TCGTGCCGCT CTTCGAGCAT TTCATGCTCG ACGCGGCGGT TCGCTACGGG
CGCCCCGCGC CGCTGCTCAC CGATCGCCAG CGCGCGAGCC TGATGCAGCG CGACTGGCCG
GGCAACGTGC GTGAGCTGCG CAACGCGGCC GACCGCTTCG TGCTCGGCGT GACGGAGGGC
ATCGTCGGCG ACGCGGGCCC GGAGACGGAC GAGCACGCCG AGCAGTCGCT CAAGGAGCGC
GTGGAGCAAT TCGAGCGCGC GGTGATTGCC GAGACGCTGA ACCGCACGGG CGGCGCGGTC
GCGACGACGG CCGACAAGCT GCACGTCGGC AAGGCGACGC TCTACGAGAA GATGAAGCGC
TACGGGCTGA GCGCGAAAGG AGAAACGGAC CGCTGA
 
Protein sequence
MANRLQVIYI EDDELVRRAS VQSLQLAGFD VVGFGSVEAA EKAIVGDATG VIVSDIRLPG 
ASGLELLAQC RERTPDVPVV LVTGHGDISM AVQAMRDGAY DFIEKPFAAE RLTETVRRAL
ERRALVLENH ALRRELAGQG VVAPRIIGRS PAIEQVRRLI ANVAPTDASV LINGDTGAGK
ELIARSLHEL SPRRDKPFIA VNCGALPEPM FESEMFGYEP GAFTGAAKRR IGKLEYASGG
TLFLDEIESM PLALQVKLLR VLQDGVLERL GSNQPIRVNC RVVAAAKGDM SEHVAAGTFR
RDLLYRLNVV TIALPPLAER REDIVPLFEH FMLDAAVRYG RPAPLLTDRQ RASLMQRDWP
GNVRELRNAA DRFVLGVTEG IVGDAGPETD EHAEQSLKER VEQFERAVIA ETLNRTGGAV
ATTADKLHVG KATLYEKMKR YGLSAKGETD R