Gene BURPS668_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0430 
Symbol 
ID4884900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp399080 
End bp401128 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content67% 
IMG OID640126358 
Productputative 2',3'-cyclic-nucleotide 2'-phosphodiesterase 
Protein accessionYP_001057483 
Protein GI126438374 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases 
TIGRFAM ID[TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0970624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTTTTC GCCGGCGGCG CCTTGCCGCC GCCCTCGTCG CGTGCGCGGC GCTCGTCGCG 
GGCTGCAACG ACGACGTCGA TTCGCCCGGC GCGCAGTCCG GCGCGAGCGC GCCCGCCGGC
ACGAAGGCGA CGCTCGCCGT GCTCGAGACG ACCGATCTGC ACACGAACGT GCTGTCGTAC
GACTACTTCA AGCTCGCGGC CGACAAGTCG CTCGGCTTCG AGCGGGTCGC GACGCTGATC
GCGCAGGCGC GCGCGCAATA TCCGAACACG CTGCTGCTCG ATAACGGCGA CACGATCCAG
GGCACGGCGC TCGCCGACTA TCAGGCGCTC GTGAAGCCCG TGTCGTGCGG CGAGACGCTT
GCGATCTACA AGGTGATGAA CGCGGCGAAG TTCGACGGCG GCGGCATCGG CAATCACGAA
TTCAACTACG GGCTGCCGTA CCTGTCGCAG GTGACGGGCA ACGCGTTCGC CGTCGACGGC
CTGCCCGATC CGGCCCGGCA GAAGAAATGC GCGGGGCCGA ACTTCCCGCA GGTGCTCGCG
AACGTGATCA GCGCGAAGAC GAACGCGCCC CTCTTCACGC CGTACACGAT CCTCACGAAG
AACGTCACCG CGACGACGCC CGACGGCCGC ACGGTCACGG CGCCCGTGAA GGTCGGCATC
ATCGGCTTCA CGCCGCCCGC GATCATGAGC TGGGACAAGC GCTGGCTCGA CGGCAAGGTC
TATACGACGG GCCTGAAGGA AGCCGCCGAG AAGTACATCC CCGAGATGCG CGCGAAGGGC
GCGGACCTCG TCGTCGCGAT CTCGCACGGC GGGCTCGACA ACTCGCCGTA CTCGCCGACG
ATGGAAAACG GCAGTTGGTG GCTGTCCACC GTGCCCGGCA TCGACACGAT GCTGATCGGC
CACTCGCACC AGGTGTTCCC CGACGCGACG AGCACCGTCG CGCAGTTCAA CCTGCCGGGC
GTCGACAAGG TCAAGGGCAC GGTCAACGGC GTGCCGACCG TGATGGCGAA CTACTGGGGC
AAGCACCTCG GCGTGATCAA GCTCGGCCTC GCGTTCGACG GCAAGACGTG GCGCGTCGAC
AAATCGCAGA CCACCGTCGA GGCGCGCTCG ATCCAGAACC CGGACAAGAG CTACGTCGAC
GCCGATCCGT CGGTGGCCGC GGCGATCGCG GCCGAGCACC AGGCGACGAT CGACTACGTG
AAGACGCCGA TCGGCAGCAC CGACTACCGG ATGACCAGCT ACTTCGCGGA CGTGGGCGAT
CCGGGCGCGA TCCAGCTCGT CAACGAGGCG CAGGCCGACT ACGTCGCGAA CTACGTGCAG
ACGAACCTGC CGCAGTATGC GTCGCTGCCG GTGCTGTCGG TGAGCGCGCC GTTCAAGAGC
GGCTTCGGCG GCGGCACCGA TTTCACCGAC GTCGCGGCGG GCGCGCTCGC GATCAACAAC
GCGGCCGATC TCTACCTGTA TCCGAACACG GTCTACGCGG TGAAGGTGAG CGGCGCGGAC
ATCAAGAACT GGCTCGAGAC CGCGGCGAAG CGCTTCAACA CGATCGACCC GACGAAAGCG
ACCGTGCAGA AGCTCGTGAG CACGTTCCCC GGCTACAACT TCGACATGTT CACGTCCGCC
GATCTGCGCT ACGAGATCGA CGTCACGCAG CCGGCGGGCA GCCGGATCCG CAACCTCGCG
TACAAGGGCG CGCCGATCGA TCCGAATGCG CAGTTCATCG TCGCGACGAA CAACTACCGC
GCGAGCGGCG GCGGCAACTT CCCCGGCCTG GACGGCAGCA AGACGATCTT CGCGTCGCCC
GACGCGAACC GCGACGTGCT GATCGCATAC ATCAAGAAGC GCGGCCGGAT CACGCGCGCG
GCGGACGGCA TGCAGCGCAG CTGGCGCTTC ACGAAGCTCG CGGGCTCGGT CGCGCACGTG
CAGTTCGCGT CGGCGCCGAA CCTCGCGGCG CTCGCGAGCA CCGCGGGCCT CGCGGGCATC
ACGCAAGTCG CGGCCGACGA CGGCTCCGGC AAGGGACTCG CGACTTACGA GATCGATCTG
ACGCAATGA
 
Protein sequence
MRFRRRRLAA ALVACAALVA GCNDDVDSPG AQSGASAPAG TKATLAVLET TDLHTNVLSY 
DYFKLAADKS LGFERVATLI AQARAQYPNT LLLDNGDTIQ GTALADYQAL VKPVSCGETL
AIYKVMNAAK FDGGGIGNHE FNYGLPYLSQ VTGNAFAVDG LPDPARQKKC AGPNFPQVLA
NVISAKTNAP LFTPYTILTK NVTATTPDGR TVTAPVKVGI IGFTPPAIMS WDKRWLDGKV
YTTGLKEAAE KYIPEMRAKG ADLVVAISHG GLDNSPYSPT MENGSWWLST VPGIDTMLIG
HSHQVFPDAT STVAQFNLPG VDKVKGTVNG VPTVMANYWG KHLGVIKLGL AFDGKTWRVD
KSQTTVEARS IQNPDKSYVD ADPSVAAAIA AEHQATIDYV KTPIGSTDYR MTSYFADVGD
PGAIQLVNEA QADYVANYVQ TNLPQYASLP VLSVSAPFKS GFGGGTDFTD VAAGALAINN
AADLYLYPNT VYAVKVSGAD IKNWLETAAK RFNTIDPTKA TVQKLVSTFP GYNFDMFTSA
DLRYEIDVTQ PAGSRIRNLA YKGAPIDPNA QFIVATNNYR ASGGGNFPGL DGSKTIFASP
DANRDVLIAY IKKRGRITRA ADGMQRSWRF TKLAGSVAHV QFASAPNLAA LASTAGLAGI
TQVAADDGSG KGLATYEIDL TQ