Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0216 |
Symbol | |
ID | 4885370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 206607 |
End bp | 208250 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640126144 |
Product | GMC family oxidoreductase |
Protein accession | YP_001057269 |
Protein GI | 126440292 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0487725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTACG ACTACATCAT CGTCGGAGGC GGCTCGGGGG GCGCGAGTCT CGCGGGGCGT CTCGCCGACG CGTGCCCGGA CGCGACGATC GCGCTGATCG AGGCGGGCGG CCACACCGAA CGCAATCTGC TCGTCAACAT GCCGGTGGGG ATCGCCGCGC TCGTGCCGTT CAAGCTCGGC ACGAACTACG GCTACGAAAC GGTGCCGCAG CCCGGCCTCG GCGGGCGCCG CGGCTATCAG CCCCGCGGCC GCGGGCTCGG CGGCTCGAGC GCGATCAACG CGATGATCTA CACGCGCGGC CATCCGCTCG ATTATGACGA ATGGGAGCAG CTCGGCTGCA CCGGCTGGGG CTGGCGCGAC GTGCTGCCGT ATTTCCGGCG CGCCGAAGGC AACGCGCGCG GCGCGAACGA ATGGCACGGC GCCGACGGCC CGCTCACGGT ATCCGATCTG CGCTTTCGTA ATCCGTTCTC CGAACGATTC ATCGCGGCCG CGCATGAGGC CGGCTATCCG CTGAACGACG ATTTCAACGG CGAGCATCAG GAGGGCGTGG GCTTCTACCA GGTCACGCAT CGCGACGGCT CGCGCTGCAG CGTCGCGCGC GCCTACGTGT ACGGCCGCAC GCGGCCGAAC CTGCACGTGA TCGTCGACGC GACGGTGCTG CGCGTCGTGT TCGACGGCAA GCGCGCGACG GGCGTCGAGT TCGCGCGCGC CGGGCGCACC GAGCAGCTTG CCGCGCGCGC GGAAGTGATT CTGTCCGCCG GCGCGTTCAA TACGCCGCAA TTGCTGATGT GCTCGGGCGT CGGCCCCGCC GCGCAACTGC GCCGGCACGG CGTCGCGCTC GTGCACGATG CGCCCGACGT CGGCGAGAAC CTGATCGATC ACATCGATTT CATCATCAAC AAGCGCGTGA ATTCGTCGGA GCTCGTCGGC ATCTGCATGC GCGGCATCGC GAAGATGACG CCCGCGCTGT TCAGCTATCT GTCCGGGCGT CGCGGAATGA TGACGAGCAA TGTCGCGGAG GCGGGCGGCT TCATCAAGAG CGAACCGGGG CTCGATCGTC CCGATCTGCA ATTGCATTTC TGCACCGCGC TCGTCGACGA TCACAACCGC AACATGCACT GGGGCTTCGG CTATTCGCTG CACGTGTGCG CGCTGCGGCC GAAGAGCCGC GGCAACGTCG CGCTCGCAAG CGGCGACGCG CGCGTCGCGC CGCTCATCGA TCCGCGCTTC TTCAGCGACG AACGCGATCT CGACCTGCTC GTGACGGGCG CGAAGGCGAT GCGCAGAATC CTCTGCGCCG CGCCGCTCGC GTCGCAGGGC GGGCGCGAGC TGTATACCGA TCCGGGCGAT ACCGATGCGC AATTGCGCGC GGCGATCGTC GCGCATGCGG ACACGATCTA CCACCCGGTC GGCACGTGCC GGATGGGCAC CGATGCGCGC GCGGTCGTCG ATCCGCAATT GCGCGTGAAA GGGGTGGACG GGCTGCGGGT GGTCGATGCT TCGGTGATGC CGACGCTCAT CGGCGGCAAC ACGAACGCGC CGACCGTGAT GATCGCCGAG CGCGCGGCCG ATTTCATCGT GGCCGCGCGC AACGGCCAGG CCGCGCCCAT GCGCGAGCGA ATCGCGGCGA CGCACGGCGG CTGA
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Protein sequence | MQYDYIIVGG GSGGASLAGR LADACPDATI ALIEAGGHTE RNLLVNMPVG IAALVPFKLG TNYGYETVPQ PGLGGRRGYQ PRGRGLGGSS AINAMIYTRG HPLDYDEWEQ LGCTGWGWRD VLPYFRRAEG NARGANEWHG ADGPLTVSDL RFRNPFSERF IAAAHEAGYP LNDDFNGEHQ EGVGFYQVTH RDGSRCSVAR AYVYGRTRPN LHVIVDATVL RVVFDGKRAT GVEFARAGRT EQLAARAEVI LSAGAFNTPQ LLMCSGVGPA AQLRRHGVAL VHDAPDVGEN LIDHIDFIIN KRVNSSELVG ICMRGIAKMT PALFSYLSGR RGMMTSNVAE AGGFIKSEPG LDRPDLQLHF CTALVDDHNR NMHWGFGYSL HVCALRPKSR GNVALASGDA RVAPLIDPRF FSDERDLDLL VTGAKAMRRI LCAAPLASQG GRELYTDPGD TDAQLRAAIV AHADTIYHPV GTCRMGTDAR AVVDPQLRVK GVDGLRVVDA SVMPTLIGGN TNAPTVMIAE RAADFIVAAR NGQAAPMRER IAATHGG
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