Gene BURPS668_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0135 
Symbol 
ID4884219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp130570 
End bp131583 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content65% 
IMG OID640126063 
ProductPBSX family phage portal protein 
Protein accessionYP_001057190 
Protein GI126440262 
COG category[R] General function prediction only 
COG ID[COG5518] Bacteriophage capsid portal protein 
TIGRFAM ID[TIGR01540] phage portal protein, PBSX family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGAACA GGCCGCGCCA AATCCGAGCG CCGGCGCGTG CCGAGGTCTT CACGTTCGAC 
GATCCGATGC CCGTCATGAA CCGGGCCGAG ATTCTCGATT ACGTCGAGTG CTGGTCGAAC
GGCGAATGGT TCGAGCCGCC GGTCAGCTTC GCCGGCCTGG CGAAATCGTT TCGCGCGAGC
ACGCACCATA GCTCGGCGCT GTTCTTCAAG GCGAACGTGC TGGCGTCGAC ATTCCGCCCG
CACCGCTGGC TGTCGCGGCA CGCGTTCGAG CGGTGGGCGC TCGATTTCCT GACGTTCGGC
AACGGCTATC TGGAACGCCG CCGCAACATG GTCGGCGGCA CGCTGCGGCT CGAACCCGCG
CTCGCGAAGT ACGTACGGCG CAAGGCCGAT TTCAGCGGCT TCGTGTACGT GAACGGCTGG
CAGGAGCGGC ACGAGTTCGA GCCCGACAGC GTGTTCCAGC TCGTGCGGCC GGACATCAAT
CAGGAGGTCT ACGGCCTGCC CGAGTATCTG AGCTCGCTGC ACTCGGCGTG GCTGAACGAA
TCGTCGACGC TGTTCCGGCG CAAGTATTAC GAGAACGGCA GCCACGCCGG CTTCATCCTG
TACATGACCG ACGCCGCGCA GAAGCAGGAC GACGTGGACA ACATGCGCGA CGCGCTGAAG
AACGCGAAGG GGCCGGGCAA CTTTCGCAAC GTGTTCATGT ACGCGCCGGG CGGGAAGAAG
GACGGCATCC AGCTCATTCC CGTGTCCGAG GTCGCCGCGA AGGACGAGTT CTTCAACATC
AAGAACGTGA CGCGCGACGA TCTGCTCGCC GCGCACCGCG TGCCGCCGCA GTTGCTTGGC
ATCGTGCCGA GCAATTCGGG CGGGTTCGGC ACGCCGGATA CCGCCGCGCG CGTGTTCGGG
CGCAACGAAA TCAGGCCGCT ACAGGCGCGC TTCGCCGAGC TGAACGACTG GCTCGGCGAC
GAGGTCATGA CGTTCGACGA TTACGAGATT CCGCCGGCGC CGGTCGCGGC GTAG
 
Protein sequence
MRNRPRQIRA PARAEVFTFD DPMPVMNRAE ILDYVECWSN GEWFEPPVSF AGLAKSFRAS 
THHSSALFFK ANVLASTFRP HRWLSRHAFE RWALDFLTFG NGYLERRRNM VGGTLRLEPA
LAKYVRRKAD FSGFVYVNGW QERHEFEPDS VFQLVRPDIN QEVYGLPEYL SSLHSAWLNE
SSTLFRRKYY ENGSHAGFIL YMTDAAQKQD DVDNMRDALK NAKGPGNFRN VFMYAPGGKK
DGIQLIPVSE VAAKDEFFNI KNVTRDDLLA AHRVPPQLLG IVPSNSGGFG TPDTAARVFG
RNEIRPLQAR FAELNDWLGD EVMTFDDYEI PPAPVAA