| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0131 |
|---|
| Symbol | |
|---|
| ID | 4884736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 127600 |
|---|
| End bp | 128502 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640126059 |
|---|
| Product | ABC-type spermidine/putrescine transport system, permease component I |
|---|
| Protein accession | YP_001057186 |
|---|
| Protein GI | 126441067 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.356031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAG ACAATCCGGA GGGTCGATTA ACCGCGCGCG ACTGGCAATT GCTGAGCCCC
GTCGTCGCCT TGCTCATGGT CGGCACATTG CTGCCGATCG CCGTCGTCGC GTCGGTCTCG
CTGATGCGCC CGCTCGCCTA CGGCGGCGTC GACTGGGGCC GCTTCTCGTT CGATGCCTAT
CTGAATCTGA TCGTCGATCG CGATTTCGAC GGCAATCTGA TATTCCAGAG CGATCATGTC
CGCATCTTCG CGCGCTCGCT CGCGCTGGCG GCCGCGACCA CGGCCGGCTG CGTCGCGCTC
GGCGTGCCCA CCGCGCTCTT CATCGCGACG CAACCGCCGC GCCGCAAGAA CGCGCTGCTG
ATTCTCGTGA CGATTCCGTT CTGGACGAGC CTCGTCATAC GCTCGTACGC ATGGATCATC
CTGATCGCCG ACCACGGTTT CGCCAACCGC GCGCTGAACG GTCTCGGCGT GCTCGCCGGC
CCGCTGGGGC TGCTCTATAC GACGCCCGCC ACGCTGATCG GCCTGCTGTA CACGTTCTTT
CCGTTCATGG TGCTGCCCGT GTACGCGAGT CTCGATGATT TCGACTGGCG CATCGTCGAA
GCCGCATACG ATCTCGGCGC CACGCAGTGG CGAGCGCTGC GCGATGTGGT GATTCCGAAC
TGCATGCCGG GCATCGCCGC GGGTATCGGC CTCGTGTTCG TGCCCGCGCT CGGCTCGTAC
GTGATCCCGA ATCTGCTCGG CGGCAGCCAT TCGATGATGA TCGGCAACCT GATCGAGATG
AAGTTCACGC AGGGGCGCAA CTGGCCGCTC GGCGCATCGC TGTCGCTCGC GCTGCTCGGG
CTCGTTCTCG CGATGATGCT GGCCCGCCGC CTGACGTCCG CGAAGCGGGA AGTGCTCGCA
TGA
|
|---|
| Protein sequence | MAKDNPEGRL TARDWQLLSP VVALLMVGTL LPIAVVASVS LMRPLAYGGV DWGRFSFDAY
LNLIVDRDFD GNLIFQSDHV RIFARSLALA AATTAGCVAL GVPTALFIAT QPPRRKNALL
ILVTIPFWTS LVIRSYAWII LIADHGFANR ALNGLGVLAG PLGLLYTTPA TLIGLLYTFF
PFMVLPVYAS LDDFDWRIVE AAYDLGATQW RALRDVVIPN CMPGIAAGIG LVFVPALGSY
VIPNLLGGSH SMMIGNLIEM KFTQGRNWPL GASLSLALLG LVLAMMLARR LTSAKREVLA
|
|---|
| |