| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0130 |
|---|
| Symbol | |
|---|
| ID | 4883962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 126722 |
|---|
| End bp | 127603 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640126058 |
|---|
| Product | ABC-type spermidine/putrescine transport system, permease component II |
|---|
| Protein accession | YP_001057185 |
|---|
| Protein GI | 126438637 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.501331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCG CGCAGCCGGC CCGCCATCGT TTCCCATTCG CGGTCTACGC GGCGCTCGGC
GCGTTCGCGT TCCTGTATGC GCCAATGGTC GCGCTCGTCG CGCTGAGCTT CAACCAGGGC
GATTCGTCGC TCGTCTGGGC CGGCTGGGGA CTGCACGGAT ATGTCGACGC GTGGCAGGAC
CCGACGCTCA TGCGCGCCGC GCGCAACTCG CTTGCGCTCG CCGGCACGTC CGCCGCGATC
GCGACGGCGC TCGCGACGCT CGCCGCGGTC GTCATGTGGG CGCGCGAAGG CCGGGGCAAG
ACCGTGATCG AAAGCCTGAT CGGCGTGCCG CTGATCGTGC CGGAAATCGT CATGGCGATC
GCGACGCTGC TGCTGTTCTC GGCGCTGTCG ATCGATCTCA GCTTCTACAC CGTGCTGCTC
GCGCACGTCG CGTTCTGCCT GCCGTTTGCC TATCTGCCGA TCCGCGCGCG TCTGCGGCGC
ATCGATCCGC TGCTGCTCGA CGCCGCCGCC GATCTGTCGG CGACGCCCTG GGCCGCGTTC
CGGCAGATCA CGCTGCCGCT CGCGCTGCCC GGCATCGCGG CGGGCGCGAT GCTCGCGTTC
CTCACGTCGA TGGACGATTT CGTGATCACG TATTTCGTCG CCGGGCCCGG CGTGACGACG
TTGCCGATGT ACATCTTCGG CGCGCTCAAG TTCGGGCTCA CGCCGAAGAT CAACGCGATA
TCGACGATCA TGCTCGCGCT ATCCGCGATC GTGGCGATCG TCGGCAGCGC GTCGGTCCGC
TCCGATGCAA CCGATGACGC GCGCGACGAA TCCCCGGCCG GCGACGCCGC CGCGCGCGCG
CACCCGCTCT TTTCCCATAC CAACGAAATC GAGGCGCTAT GA
|
|---|
| Protein sequence | MNSAQPARHR FPFAVYAALG AFAFLYAPMV ALVALSFNQG DSSLVWAGWG LHGYVDAWQD
PTLMRAARNS LALAGTSAAI ATALATLAAV VMWAREGRGK TVIESLIGVP LIVPEIVMAI
ATLLLFSALS IDLSFYTVLL AHVAFCLPFA YLPIRARLRR IDPLLLDAAA DLSATPWAAF
RQITLPLALP GIAAGAMLAF LTSMDDFVIT YFVAGPGVTT LPMYIFGALK FGLTPKINAI
STIMLALSAI VAIVGSASVR SDATDDARDE SPAGDAAARA HPLFSHTNEI EAL
|
|---|
| |