| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS668_0098 |
|---|
| Symbol | |
|---|
| ID | 4882413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 668 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009074 |
|---|
| Strand | - |
|---|
| Start bp | 94346 |
|---|
| End bp | 97198 |
|---|
| Gene Length | 2853 bp |
|---|
| Protein Length | 950 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640126026 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001057153 |
|---|
| Protein GI | 126440554 |
|---|
| COG category | [L] Replication, recombination and repair
[S] Function unknown |
|---|
| COG ID | [COG4643] Uncharacterized protein conserved in bacteria
[COG5519] Superfamily II helicase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAT TCGAGCGGGC AAGTGTCGCG CTCGGCTATG TTCCGGCCGA CGACCGAGAC
ACGTGGCGTC AGGCCGGCAT GGCGCTCAAG GCCGAGTTCG GCGAAGAGGG TTTCACCCTC
TGGAACGAAT GGAGCCAAGG CGCGCAAAAC TACAACGCAA GAGACGCCCG CGATGTATGG
AAGTCGTTCA AGGGCGGCAA GATCACCATC AACACGCTGT TTCATCTCGC CAAACAAGGC
GGCTTCGATC CGCGCGCGCA TCGCGCCAAG TCGATCGACC CAGCACAGCG CGAGCGACAG
CACGCCGAGC GCGCCGCCCG CGAAGCGGCC GAGTTGGCGA CACTCACCGA GAAGCAGCAA
GCCGCATCGG CGCTCGCCGA ATCGATCTGG TCGGCGGCCG AGCCCGCGCC GGCCGATCAC
GCGTACCTCG TTCGCAAGCG CATCCCGGTC GACGCGCTGC GCGTCTATCG CGGCGGCTTG
TGCATCGGCA CGGCCGCATG CGACGGCGCA CTGGTCATCG CAGCGCGTGA CGCGGACGGC
AAGCTGTGGA CGCTGGAGTT CGTCCTCACG GACGGCCAGA AACGCTATCT GCCGAACGGC
CGCAAGGCGG GCTGCTTCTC GCTGATCGGC GGGGCGGTAT CGTCCACGCT GCTGATTGGC
GAGGGTTACG CCACGTGCGC GACGCTCGTG GCCGCGACCG GCTATCCGGC CGCTGTCGCG
TTTGACGCAG GCAACCTGCA CGCCGTGGCG ACGGCACTGC GCGGCCAGTA TCCGGACGCC
CGCATCGTCG TGTGCGCCGA CGACGACCAC ACGACGAAGG GCAATCCGGG CGTGACGAAG
GCTCGCGCGG CGGCCGAGGC CGTCGCCGGC ATCGTGGCCG TACCCGACTT CGGTCCGAAC
CGCCCGGCGG CCGGGACCGA CTTCAACGAC CTGGCTGCGC ACGTCGGCCC GGATGCGGTG
GCCGCCGCCG TGCGGGCTGC GCTCGCGCCG GTCGGCTCAC CGGATGCCGG CAAGGCCAAG
ACAGCACTGC CCGCCGCGAA GCCCGCCAAG CGCCCGAAAA CGGCTTGCGC GCAGGACGGC
AAGTCGCGGT TCGTCGTCGA CGACAAGGGC GTGTGGTTTC ACGGCTTCAA CAATCAGGGC
GATCCGCTGC CGCCGCATTG GGTCAGCACG CGGATCGACG TGATTGCGGA GACGCGCAAC
GAGATGAACA GCGAGTGGGG CTACCTGCTC GAATTCACGG ACCGCGACGG CATCCTCAAA
CGGTGGGCGG TGCCGGCGGG GCTCTTTGCC GGCGACGGCA CGGAGCTGCG CCGCATGCTG
CTCGATATGG GCGTGAAGCT CGGCGTGACG CAGATCGCCC GCACGCAGAT CGCGAACTAT
GTGCAGATGG CGCAGCCGGA CGAGCGCGTG CGCTGCGTGC CGCGCGTCGG CTGGCATCAC
GGCGCGTTCG TGCTGCCCGA TCGCGTGATC GGCACCGGCA AAGAGGCGCT GATCTATCAG
GCCGACACGC CGATCCAGAG CCAGTTCAAG GAGCGCGGCA CGCTGGAGGA CTGGCAACGC
GAGGTCGCGG CCTACTGCGT CGGCAATAGC CGGCTGCTGT TCTGCGTCGC TACCGCCTTC
GCTGGTCCGC TGCTGCACTT CTCCGGGCTT CAGTCGGGCG GCTTTCACTT GCTCGGCACG
ACGTCGAAAG GCAAGTCGAC GGGCGGTGTC ATCGCCGCGT CCGTGTTCGG CTCACCGGAC
TACGTGCGGA GCTGGAAGGC GACCGACAAC GCGCTCGAAG CCGTCGCCAC GCAGCATAGC
GACGCGCTGC TGATTCTCGA CGAAATCGGG CAGGTCGAGC CGCGCTTGGT TGGAGACGTG
ATCTACATGC TCGCGAACGA GTCGGGCAAG GCCCGCGCGT CGCGTAGCGG CTCGGCAAAG
CCGGTTCTCA CGTGGCGACT GCTGTTCCTG TCGAACGGCG AAAAGAGCGT GTCCGCGTTG
ATGGCCGAAG GCAACAAGCC GATGAAAGGC GGTATCGAGG TGCGCTTGCC CGCGATCCCG
GCCGAGGTCG GCGAAATGGG CGTCGTGGAG AAGCTGCACG GGTTCCCGAC GCCGGCCGCG
CTGATCGAGC ATCTAGAGCG GCACGCCGGC AGGCACTACG GCACGGCGGG GCCGGCCTTC
ATCGAATGGG CATCGTCGCA GGCCGATGAG CTGGCTGAGC ATCTGCGCGT GCGCGTCGAC
GAGCTGGTCG GGCAATGGGT GCCGGACGGC TCGCATTCGC AGGTCGCGCG CGTCGCCAAG
CGGTTCTGCC TCGTTGCGGT GGCCGGCGAG CTGGCGACAG CGCACGGGCT GACCGGCTGG
CCGCAGGGCG AAGCGGTCGA GGCCGCGCGT CGCTGCTTCG AAGGCTGGCT CGAACTGCGC
GGCGGCACCG GCAACTCGGA CGAGGCCGAA GCCGTGCGGC AGGTACAGCA TTTCCTCGCC
GCGCACGGCG ACAACCGTTT CGTGTGGATG AACCGTGCGC AGGACGACCA TCGGCCGAAC
GTGCCGCATC GAGCGGGCTT CAAGCAGCAC GTGAAGCGCG ACGAGCGCCG CACGCCCATC
GCGTCCGATC GCGAGTATTA CGCCGAGTTC GGCGGCAAGA TGAGCGCCGA CGATGCCGAA
AGCGTCGAGA CGGAATACCT GATCGAAGCG GCCGTGTTCC GCAAGGACGT GTGCGCCGGC
TTCGATCACA AGATCGTCGC CAAGGCACTA ATGAAGCGGG GCGTGCTGAT GCCGCGCAGC
GACGGCTATC CGTACCGGCA GGAATACATC CCCGGTCACG GCAAGTTCAT GGTCTATCGC
GTGCTGCCGT CGATCTTCAC GCTTGAGCTG TGA
|
|---|
| Protein sequence | MSEFERASVA LGYVPADDRD TWRQAGMALK AEFGEEGFTL WNEWSQGAQN YNARDARDVW
KSFKGGKITI NTLFHLAKQG GFDPRAHRAK SIDPAQRERQ HAERAAREAA ELATLTEKQQ
AASALAESIW SAAEPAPADH AYLVRKRIPV DALRVYRGGL CIGTAACDGA LVIAARDADG
KLWTLEFVLT DGQKRYLPNG RKAGCFSLIG GAVSSTLLIG EGYATCATLV AATGYPAAVA
FDAGNLHAVA TALRGQYPDA RIVVCADDDH TTKGNPGVTK ARAAAEAVAG IVAVPDFGPN
RPAAGTDFND LAAHVGPDAV AAAVRAALAP VGSPDAGKAK TALPAAKPAK RPKTACAQDG
KSRFVVDDKG VWFHGFNNQG DPLPPHWVST RIDVIAETRN EMNSEWGYLL EFTDRDGILK
RWAVPAGLFA GDGTELRRML LDMGVKLGVT QIARTQIANY VQMAQPDERV RCVPRVGWHH
GAFVLPDRVI GTGKEALIYQ ADTPIQSQFK ERGTLEDWQR EVAAYCVGNS RLLFCVATAF
AGPLLHFSGL QSGGFHLLGT TSKGKSTGGV IAASVFGSPD YVRSWKATDN ALEAVATQHS
DALLILDEIG QVEPRLVGDV IYMLANESGK ARASRSGSAK PVLTWRLLFL SNGEKSVSAL
MAEGNKPMKG GIEVRLPAIP AEVGEMGVVE KLHGFPTPAA LIEHLERHAG RHYGTAGPAF
IEWASSQADE LAEHLRVRVD ELVGQWVPDG SHSQVARVAK RFCLVAVAGE LATAHGLTGW
PQGEAVEAAR RCFEGWLELR GGTGNSDEAE AVRQVQHFLA AHGDNRFVWM NRAQDDHRPN
VPHRAGFKQH VKRDERRTPI ASDREYYAEF GGKMSADDAE SVETEYLIEA AVFRKDVCAG
FDHKIVAKAL MKRGVLMPRS DGYPYRQEYI PGHGKFMVYR VLPSIFTLEL
|
|---|
| |