Gene BURPS668_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0088 
SymboldnaN 
ID4883017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp84017 
End bp85120 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID640126016 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001057143 
Protein GI126438733 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGG TCAAGACCGA ACGAGACACC CTCCTTAGGC CGCTGCAAAC CGTGAGCGGT 
ATCGTCGAAC GCCGCCACAC GTTGCCGATC CTCGCCAATC TGTTGATCAC GAAGAACGGC
CCGGACGTGT CGTTCCTGTC GACCGACCTC GAGCTCCAGA TCACGACGCG CGCCGATTTC
GGCGTCGGCG GCGATCAGGT CGCGACGACC GTCGCGGCCC GCAAGCTGCT CGACATCCTG
CGCGCGATGC CCGACGGCCA GGTCACGCTG TCGCTCGCCG ACAAGCGCCT GACGGTCCAG
TCCGGCAAGA GCCGCTTCGC ACTGCAAACG CTCGCGGCCG ACGAGTTCCC GACCGTCGCG
CAATCGAAGG ATTTCGGCGC AAGCCTCGCC GTTCCGCAGA AGGCGTTCCG CCAGTTGCTC
GGCATGGTGT ACTTCGCGAT GGCGCAGCAG GACATCCGCT ACTACCTGAA CGGGATGCTG
CTCGTCGTGG ACGGCGACCG CCTGATGGCG GTGGCGACCG ACGGCCACCG CCTCGCGTTC
TCGTCGATGA AGATCGAAGG CTCGTTCGGC CGCCAGGAAG TGATCGTGCC GCGCAAGACG
ATTCTCGAGC TGCAGCGCCT GCTCGAGGAC ATCGACGACA CGGTCAAGAT CGACATCGCG
CAGACCCAGG CGAAGTTCAC GTTCGGCCAG GTCGAGCTGG TGTCGAAGCT CGTCGAGGGC
AAGTTCCCGG ACTTCCAGCG CGTGATTCCG AAGGCGCACA AGAACACGTT CGAGATCGGC
CGCGAAGAGT TGCAGCGCTC GCTGCAGCGC GCGGCGATCC TCACGTCCGA CAAGTTCAAG
GGCGTGCGCT GCATCATCGC GCCCGGCCAG TTGAAGATCA TGTCGACGAA CGCCGATCAG
GAAGAGGCGC AGGAAGAACT GGAAATCGCC TACCAGGGCG ACACCGTCGA CATCGGCTTC
AACGTCACGT ATCTGCTCGA CGTGCTCGCG AACCTGAAAG TCGACACCGT TCAGGTGAGC
CTCGGCGACG CGAGCTCGAG CGCCCTCATC ACCGTGCCCG AGAACGACGA ATTCAAGTAC
GTGGTGATGC CGATGCGCAT CTGA
 
Protein sequence
MQLVKTERDT LLRPLQTVSG IVERRHTLPI LANLLITKNG PDVSFLSTDL ELQITTRADF 
GVGGDQVATT VAARKLLDIL RAMPDGQVTL SLADKRLTVQ SGKSRFALQT LAADEFPTVA
QSKDFGASLA VPQKAFRQLL GMVYFAMAQQ DIRYYLNGML LVVDGDRLMA VATDGHRLAF
SSMKIEGSFG RQEVIVPRKT ILELQRLLED IDDTVKIDIA QTQAKFTFGQ VELVSKLVEG
KFPDFQRVIP KAHKNTFEIG REELQRSLQR AAILTSDKFK GVRCIIAPGQ LKIMSTNADQ
EEAQEELEIA YQGDTVDIGF NVTYLLDVLA NLKVDTVQVS LGDASSSALI TVPENDEFKY
VVMPMRI