Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_0009 |
Symbol | gspF |
ID | 4884293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 12154 |
End bp | 13371 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640125937 |
Product | general secretion pathway protein F |
Protein accession | YP_001057064 |
Protein GI | 126441326 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCCT TCCGTTTCGA AGCGATCGAC GCGTCGGGGC GCGCGCAAAA GGGCGTGATC GAAGCCGACA GCGCGCGCAA CGCGCGCGGC CAGCTGCGCA CGCAGGGCTT GACGCCGCTC GTCGTCGAGC CGGCCGCGAG CGCGCAGCGC GGCGCGCGCA GCCAGCGCCT CGCGCTCGGC CGCAAGCTGT CGCAGCGCGA GCAGGCGATC CTCACGCGCC AGCTCGCGAG CCTGCTCGTC GCCGGGCTGC CGCTCGACGA GGCGCTCGCG GTGCTGACCG AGCAGGCCGA GCGCGATTAC ATCCGCGAGC TGATGGCCGC GATCCGCGCG GAAGTGCTCG GCGGCCATTC GCTCGCGAAC GCGCTCACGC AGCATCCGCG CGATTTTCCG GAGATCTACC GCGCGCTCGT CGCGGCGGGC GAGCACACCG GCAAGCTCGG CATCGTGCTG TCGCGGCTCG CCGACTACAT CGAGGAGCGC AACGCACTCA AGCAGAAAAT CCTGCTCGCG TTCACGTATC CGGCGATCGT CACGGTGATC GCGTTCGGCA TCGTTACGTT CCTGCTGAGC TACGTGGTGC CGCAGGTCGT CAACGTGTTC GCGAGCACGA AACAGCAGTT GCCGGTGCTC ACGATCGTGA TGATGGCGCT GTCCGATTTC GTCAGACACT GGTGGTGGGC GATCCTGATC GGGATCGCGG CCGTCGTCTA TCTGGTGAAG GCGACGCTCT CGCGCGACGG CCCGCGCCTC GCGTTCGACC GCTGGCTTTT GACTGCCCCG CTCGCGGGCA AGCTCGTGCG CGGCTACAAC ACGGTGCGCT TCGCGAGCAC GCTCGGCATC CTGACCGCGG CGGGCGTGCC GATCCTGCGC GCGCTGCAGG CGGCGGGCGA GACGCTGTCG AACCGCGCGA TGCGCGGCAA CATCGAGGAC GCGATCGTGC GCGTGCGCGA AGGCTCGGCG CTCTCGCGCG CGCTCAACAA CGTGAAGACG TTTCCGCCCG TGCTCGTGCA CCTGATCCGC TCGGGCGAGG CCACGGGCGA CGTGACGACG ATGCTCGACC GCGCGGCCGA AGGCGAATCG CGCGAGCTCG AGCGGCGCAC GATGTTCCTC ACGAGCCTGC TCGAGCCGCT GCTGATTCTC GCGATGGGCG GCATCGTGCT CGTGATCGTG CTGGCGGTGA TGCTGCCGAT CATCGAGCTG AACAACATGG TGCAGTGA
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Protein sequence | MPAFRFEAID ASGRAQKGVI EADSARNARG QLRTQGLTPL VVEPAASAQR GARSQRLALG RKLSQREQAI LTRQLASLLV AGLPLDEALA VLTEQAERDY IRELMAAIRA EVLGGHSLAN ALTQHPRDFP EIYRALVAAG EHTGKLGIVL SRLADYIEER NALKQKILLA FTYPAIVTVI AFGIVTFLLS YVVPQVVNVF ASTKQQLPVL TIVMMALSDF VRHWWWAILI GIAAVVYLVK ATLSRDGPRL AFDRWLLTAP LAGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAAGETLS NRAMRGNIED AIVRVREGSA LSRALNNVKT FPPVLVHLIR SGEATGDVTT MLDRAAEGES RELERRTMFL TSLLEPLLIL AMGGIVLVIV LAVMLPIIEL NNMVQ
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