Gene BURPS668_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS668_0008 
SymbolgspE 
ID4883068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 668 
KingdomBacteria 
Replicon accessionNC_009074 
Strand
Start bp10656 
End bp12149 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content70% 
IMG OID640125936 
Productgeneral secretory pathway protein E 
Protein accessionYP_001057063 
Protein GI126440623 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCAGG CGCTCGCGCA AGGCGCCCCG GATCAGCCGG CCGCCGGCGC GCCGTCGCCG 
ATCGCCGCGC GGCTGTTGCC GTACGGCTTC GCGAAGGCCG GCCAGATCCT GATCGCACAC
CAGCACGCGG ACACGCTCGA GGTGTGGATC AGCGAGCGCA CGAGCTCGGC CGCGCTTGCC
GAAGTCGCGC GCAACTTCGG CGCGATCTCG TTGCAGCGCA TGCCGGCCGA CGAGCTCGCG
CAGGCGATCA ACCATGCGTA CGCGCGCCAG GACGGCAGCG CCGCGCAGAT CGTCGGCGAG
GTCGAGGGCG AAGTCGATCT GTCGCGGCTG ATGCAGGACA TCCCCGAGGT CGAGGATCTG
CTCGAATCGG AAGACGACGC GCCGATCATC CGGATGATCA ACGCGCTCCT CACGCAAGCG
GCGCGCGAGC AGGCGTCGGA CATCCACATC GAGCCGTTCG AGAACGCGTC GGTCGTGCGC
TTTCGCGTGG ACGGCACGCT GCGCGACGTC GTGCGCCCGA AGAAGGCGCT GCACGGCGCG
CTGATCTCGC GCATCAAGAT CATGGCGCAG CTCGACATCG CCGAAAAGCG CCTGCCGCAG
GACGGCCGGA TCACGCTGCG CGTGGGCGGG CGGCCCGTCG ACGTGCGGGT GTCGACGCTG
CCGACCGGGC ACGGCGAGCG CGCGGTGCTG CGTCTGCTGG AGAAGGATGC GCAGCGGCTG
AATCTGGAAG CGCTCGGGAT GGGCCGCGAC ACGCTCGTGC AGTTCGACAA GCTGATTTCC
CGCCCGCACG GCATCGTGCT CGTGACGGGG CCGACCGGCT CGGGCAAGAC GACGACGCTG
TACGCGTCGA TGTCGCGGCT CGAAACCGCG ACGACCAACA TCATGACGGT CGAGGATCCG
ATCGAATACG ATCTGTCCGG CATCGGCCAG ACGCAGGTGA ACGAGCGGAT CGGGATGACG
TTCGCGCGCG CGCTGCGCTC GATCCTGCGT CAGGACCCGG ACATCATCAT GATCGGCGAA
ATCCGCGATC TCGAAACCGC GCAGATCGCC GTGCAGGCGT CGCTCACGGG CCACCTGGTG
CTCGCGACGC TGCACACGAA CGACGCGGCG TCGGCCGTCA CGCGTCTCAC CGACATGGGC
GTCGAGCCGT ACCTGCTCGC GTCTTCGCTG CTCGGCGTGC TCGCGCAGCG GCTCGTGCGC
CAGCTCTGCC CGGCGTGCAA GGAGGAGCGG CACGAGGGCG GCCGCGCGGT CTGGCATCCG
GTCGGCTGCG ACAAGTGCGG GCATTCGGGC TACACGGGGC GTCGCGGCGT GTACGAGCTA
CTCGTCATCG ACGATTCGAT CCGCTCGCTG ATTCACCGCA ACGCGGCCGA TGCGGAGATT
CTCGCCACCG GCCGCGCGAA CGGGATGCGC ACGCTGCGCG ACGACGCCGA GCGCTGGCTC
GCGGCGGGCG CGACGTCGCT CGAGGAAGTG CTGCGCGTGA CGGGAGGCGC ATAG
 
Protein sequence
MTQALAQGAP DQPAAGAPSP IAARLLPYGF AKAGQILIAH QHADTLEVWI SERTSSAALA 
EVARNFGAIS LQRMPADELA QAINHAYARQ DGSAAQIVGE VEGEVDLSRL MQDIPEVEDL
LESEDDAPII RMINALLTQA AREQASDIHI EPFENASVVR FRVDGTLRDV VRPKKALHGA
LISRIKIMAQ LDIAEKRLPQ DGRITLRVGG RPVDVRVSTL PTGHGERAVL RLLEKDAQRL
NLEALGMGRD TLVQFDKLIS RPHGIVLVTG PTGSGKTTTL YASMSRLETA TTNIMTVEDP
IEYDLSGIGQ TQVNERIGMT FARALRSILR QDPDIIMIGE IRDLETAQIA VQASLTGHLV
LATLHTNDAA SAVTRLTDMG VEPYLLASSL LGVLAQRLVR QLCPACKEER HEGGRAVWHP
VGCDKCGHSG YTGRRGVYEL LVIDDSIRSL IHRNAADAEI LATGRANGMR TLRDDAERWL
AAGATSLEEV LRVTGGA