Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2174 |
Symbol | |
ID | 4909388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 2008630 |
End bp | 2009292 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640125928 |
Product | RecB family-like endonuclease |
Protein accession | YP_001057055 |
Protein GI | 126460777 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4998] Predicted endonuclease (RecB family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCCA GATTTGAAAA ACACGTGCTT GATATTTTAC CAGCGCTTGG TCTACAGCCC AGGGCCCTAC GGTATAAAGT CTACAGAAAC GGTGTCGAAG TAGGCGAGGT GGACATACTC GCAGTTGATG AAAAAGGTGA CGTTTACGCT ATAGAGGTTA AGGCTGGAAA GGTGGACATA AGTGGAATAA GGCAAGCCTT CGTAAACGCC AAGCTACTAG GCGCAAAGCC GTTGATAATA GCAAGAGGTT ATGCTGACGA AGGCGCATAT GAGCTCGCCA AGGAGTTAGG CGTAGAGGTA GTCCTACTTC CCGACTACAT ATTTCTCTCT TTAGACGACT TATACACAGC TTTTGTAAAT GCCTTTGCTA GATTTTTTGC AACACTATTG GAGGCATTTA TCACCCTCAC AGAGGAAGAA GCACAAGTAA TCGAACATTG CCAAGATCTA CAATGTATAT GTCAACAAAT AGATTGTAAT ACTTTATTTA AAAAACTTCC TCGTGAGGCA AAAAATTATG AGATACTATC TGCAGCTGTA AAAATAAGGA AAATTTTATC AACAGTAGTG AATCAAGTAG CTAAGTTTAA TACCAGTGGC TTAAGTAGCG TGCATGGAGA AGTTGGTACA AGAACTGAAG GAGAAACTTC GCCCAAAAAT TAG
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Protein sequence | MGARFEKHVL DILPALGLQP RALRYKVYRN GVEVGEVDIL AVDEKGDVYA IEVKAGKVDI SGIRQAFVNA KLLGAKPLII ARGYADEGAY ELAKELGVEV VLLPDYIFLS LDDLYTAFVN AFARFFATLL EAFITLTEEE AQVIEHCQDL QCICQQIDCN TLFKKLPREA KNYEILSAAV KIRKILSTVV NQVAKFNTSG LSSVHGEVGT RTEGETSPKN
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