Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2172 |
Symbol | |
ID | 4908319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 2007160 |
End bp | 2007474 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640125926 |
Product | hypothetical protein |
Protein accession | YP_001057053 |
Protein GI | 126460775 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG AAAATATTGA AAGAAGGCTT GTAGAAGCTC TAATAGTGCT CTTACTAAAT GCAAGGGGCA AAGTAGTAAG CATTAAAGCA ACCTCGCTCG CAAAGATGGC AGGCTTTGGC TCAAACCACA GCGCCATCCT CAAAGCAGCT AGACTACTCC GCAAACTCTC AATGTATAAG TTTCTCAAAA CAGAGCCGAG CTCAAAGCGT AGCAAGACCT ACCGCTACAT TTTAAGGATA GACGACGAAC TGTGGCAAAT TGCAAAAAAA GACCCCGAAA GGGCCAAGGA GATAATACTA AAATTATTAA GTTAA
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Protein sequence | MKFENIERRL VEALIVLLLN ARGKVVSIKA TSLAKMAGFG SNHSAILKAA RLLRKLSMYK FLKTEPSSKR SKTYRYILRI DDELWQIAKK DPERAKEIIL KLLS
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