Gene Pcal_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2172 
Symbol 
ID4908319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp2007160 
End bp2007474 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content42% 
IMG OID640125926 
Producthypothetical protein 
Protein accessionYP_001057053 
Protein GI126460775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG AAAATATTGA AAGAAGGCTT GTAGAAGCTC TAATAGTGCT CTTACTAAAT 
GCAAGGGGCA AAGTAGTAAG CATTAAAGCA ACCTCGCTCG CAAAGATGGC AGGCTTTGGC
TCAAACCACA GCGCCATCCT CAAAGCAGCT AGACTACTCC GCAAACTCTC AATGTATAAG
TTTCTCAAAA CAGAGCCGAG CTCAAAGCGT AGCAAGACCT ACCGCTACAT TTTAAGGATA
GACGACGAAC TGTGGCAAAT TGCAAAAAAA GACCCCGAAA GGGCCAAGGA GATAATACTA
AAATTATTAA GTTAA
 
Protein sequence
MKFENIERRL VEALIVLLLN ARGKVVSIKA TSLAKMAGFG SNHSAILKAA RLLRKLSMYK 
FLKTEPSSKR SKTYRYILRI DDELWQIAKK DPERAKEIIL KLLS