| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2166 |
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| Symbol | |
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| ID | 4909800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 2002131 |
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| End bp | 2002928 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640125920 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_001057047 |
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| Protein GI | 126460769 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTCC AAGTCGTTGA ACAAGTTCTA TTCGCCATAT TGGTCTTATT CGCGTTAATA
GTCTTGGTGG CAATTCTCTC TTCTGCGATT AGGATAATCC CAGAGTATCA GAGGGCTGTC
AAGTTTAGGC TTGGCCGCGT GGTGGGCGTC GTGGGGCCCG GCATTGTCTT CATTATACCT
ATTATAGACA CCATTATGCG CTATGATCTA AGAGTTGAAC TCGTGGATGT GCCAGCTCAG
AGGGCCTTGA CGAGGGATAA CGTTGAAGTG ACTATAGATG CTGCGATATA TCTCAGGGTG
ATAGACCCGT TGAGAACTGC GCTGACGGTT AGAAACCACG TGCCTGCCGT GGCCACATAC
GCGGCTTCTA CATTACGCGA CGTAGTTGGC ATGGTTGACT TAGACACATT ACTTGCACAC
AGAGACGAGA TTGCAAAAAG AATAGCCTCT ATCGTTGATG AACATGTGAC GCCGTGGGGC
GTGAAGGTCA CGGCCGTGGC TATTAAGGAC ATTAAGCTTC CCGACGTGTT GCTCCGCGCC
ATGGCCAGCC AGGCGGAGGC CGAGAGAGTT AGGAGGGCTA AGATTACCCT CGCCTCAGCT
GAGTACGAGG CCAGCAAGAT CTACCTAGAG GCAGCTGAGA GATATTCTCA AAACCCAACC
GCAGTCCAGC TGAGGATGAT AGACGCGCTT ATAGAAATTG CCAGAGAACA CAACTTGATA
ATAGTGACGC CGCCCACCTT TGAATACGTG GCCCTACCTC TGGCGTTGAC AAAGAAGGGA
AAAAATGAGG GCGGCTAG
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| Protein sequence | MILQVVEQVL FAILVLFALI VLVAILSSAI RIIPEYQRAV KFRLGRVVGV VGPGIVFIIP
IIDTIMRYDL RVELVDVPAQ RALTRDNVEV TIDAAIYLRV IDPLRTALTV RNHVPAVATY
AASTLRDVVG MVDLDTLLAH RDEIAKRIAS IVDEHVTPWG VKVTAVAIKD IKLPDVLLRA
MASQAEAERV RRAKITLASA EYEASKIYLE AAERYSQNPT AVQLRMIDAL IEIAREHNLI
IVTPPTFEYV ALPLALTKKG KNEGG
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