Gene Pcal_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2156 
Symbol 
ID4910237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1993534 
End bp1994643 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content51% 
IMG OID640125910 
Producthypothetical protein 
Protein accessionYP_001057037 
Protein GI126460759 
COG category[S] Function unknown 
COG ID[COG1415] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCAA CTGGCGTTGC CGATTTGCCT CTTCACACGG GCCACGTCCC GCCGTGGCTG 
TTTGACAGAA TGAGAAAATT GGCCAGGCTC ACGTTGCGCA TAATGTACGA CCTATATGGC
CCAGACGGCG TTGTGGAGAG ATTTTCAAAC CCCGTGTTCT TCCAAGCGTT TAACAACCTG
ATAGGAATGG ACTACGACAG TAGCGGCTCC ACCACGGTAA CTACGGCCGT TGTAAAAGAA
GTGTTGGCAA ATTCCGATAT CCCAATCCGC GTGGCAGGCG GCAAAGGTCG ACGGGCGCTC
GACACACCCA AGGAACTTGC AGACATTGCT CGCCACTTCG ACCTAGATGC ATCAGCCTTG
GTTAACGCGT CGAGGCTAAC CGCTAAGGTT GACAACGCGT TAGTGCAAGA CGGCTACACC
ATATACCACC ACGCCTTTTT TGTCTCAGAA AGCGGCAAGT GGAGCGTAGT TCAACAAGGC
ATGAACCCAG AGGTTAAAAT GGCTAGGCGA TACCACTGGC TAGCAACAGA GGACTACTTC
AACGACCCAC ACACTGGAAT AATTGGAATT AGGAGGAAGG ACGTGTTAAA CCTAGCCTCC
AGACGTAGCG AGGAAAATCG CAAAGTCGTC CTAGAACTCG TAAACGAGGG CCCCTACAAG
GTGGCAAAGT ATTTAGCCAT ACTGCGTGGA CAAACCGTCT TCGGCCCTAC GTACTTCCAC
CCCCATGTGA AAGTGGACGT CGATGTAAAA ACTGTAGTAA GAAATCTGCC GCCGCCTAAA
TCCGTGGCAG ACTTCAAGGA GTTGTTACTA AGGTATGGGG TTGGCCCAAA GACGTTAAGG
GCGCTTTCCC TAGTGGCAGA GCTCATATTT AAGGCGCCGG CGGATTGGAA CGACCCAGCC
ATAGACCCAT TTAAATTCGC CTTTGCCGTA GGCGGAAAAG ATGGAGTTCC CTATCCAGTG
GACAGAAAGG TGTACGACGA ACTAATAGCA ATCTTAGACG CAATTATAGA TAAGGCGCGT
AGCGACCCTG GCATCTACAA ATATCTAACG CATTTGGCGA AAAAAGCCGA GTCATGGCAA
TTTCCAGACC ATTTAAAGAG GCCGACCTAG
 
Protein sequence
MRPTGVADLP LHTGHVPPWL FDRMRKLARL TLRIMYDLYG PDGVVERFSN PVFFQAFNNL 
IGMDYDSSGS TTVTTAVVKE VLANSDIPIR VAGGKGRRAL DTPKELADIA RHFDLDASAL
VNASRLTAKV DNALVQDGYT IYHHAFFVSE SGKWSVVQQG MNPEVKMARR YHWLATEDYF
NDPHTGIIGI RRKDVLNLAS RRSEENRKVV LELVNEGPYK VAKYLAILRG QTVFGPTYFH
PHVKVDVDVK TVVRNLPPPK SVADFKELLL RYGVGPKTLR ALSLVAELIF KAPADWNDPA
IDPFKFAFAV GGKDGVPYPV DRKVYDELIA ILDAIIDKAR SDPGIYKYLT HLAKKAESWQ
FPDHLKRPT