| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2154 |
|---|
| Symbol | pyrB |
|---|
| ID | 4908397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1991983 |
|---|
| End bp | 1992900 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640125908 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001057035 |
|---|
| Protein GI | 126460757 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGTTCG GTAGAGACGT AATTTCGGCT CGGGACTTCA GTCGAGAAGA CTTGTACGAG
CTCTTCGAAA TGGCCAAGTA CATGGAGAAG TTTGCAAAAT CGCGTGTAGA CTTTCTCAGA
GGCAAAGTTA TGGCTACGGC CTTTTTCGAG CCATCAACTA GGACTAGGCT CAGCTTCGAG
GTTGCGATGA AGAGACTTGG CGGCGACGTC ATAGGATTTG GAAGCGCGGA GGGCACAAGC
GTTGAGAAGG GTGAGACGCT GGCTGACACG ATAAGGATGT TAGACGCATA CGCCGACGTC
ATAGTAATTA GGCACAAGTA CGAGGGGGCC GCCAAGCTGG CGGCAGAGGT GGCCGAAAGC
CCTGTTGTCA ATGGGGGCGA CGGGGCGTAC AACCACCCCA CGCAGGCCAT GTTAGACGTG
TACACAATCT GGAGGGAGTT CGGCCACGTT GACGGCCTCA ACGTGGGATT GATGGGCGAC
TTGAGAAACG CCAGGACGAT AAACAGCCTA GTGGAGACTC TTGCGAATTT CAACGTTAGG
CTCTACTTTA TTTCGCCAGA GTTTTTAAGG CCGAGGGCCG AGACCGTGGA CTACGCGAGA
GACAAAGGCG TAAAAATGAG CTTTCACACC AACGTAGAAG AGGTGGTACA TGAGCTAGAC
GTGTTATACG TGGTCAGAAT ACAGAAAGAG CGCTTTTTAG ACCCACTGGA GTACGAAAGA
GTCAAGGGTA GTTATAGGGT AACACTAGAG CTTTTAAAGA ACGCCAAGAG GGGGCTTATA
GTGCTACATC CACTGCCCCG GGTCGACGAA ATCGACCATA GGATAGATTC TACGCCACAT
GCAAAGTACT TCATCCAAGC GGCGCTGGGC GTGCCTCTGA GAATGGCACT TATATACCTA
ATTCTATCTC CGCCATGA
|
|---|
| Protein sequence | MWFGRDVISA RDFSREDLYE LFEMAKYMEK FAKSRVDFLR GKVMATAFFE PSTRTRLSFE
VAMKRLGGDV IGFGSAEGTS VEKGETLADT IRMLDAYADV IVIRHKYEGA AKLAAEVAES
PVVNGGDGAY NHPTQAMLDV YTIWREFGHV DGLNVGLMGD LRNARTINSL VETLANFNVR
LYFISPEFLR PRAETVDYAR DKGVKMSFHT NVEEVVHELD VLYVVRIQKE RFLDPLEYER
VKGSYRVTLE LLKNAKRGLI VLHPLPRVDE IDHRIDSTPH AKYFIQAALG VPLRMALIYL
ILSPP
|
|---|
| |