| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2149 |
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| Symbol | |
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| ID | 4908269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1986201 |
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| End bp | 1987688 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125903 |
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| Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
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| Protein accession | YP_001057030 |
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| Protein GI | 126460752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTCT TTGAAATAGT CGCGAAAGAC TTGGGGGGAA GGATCGGCAG GCTTTATACG
AAAAGCGGCG TGGTAGAAAC CCCGGCGTTG TTCCCAGTGG TTGACCCGAG GAAGCAAGAG
GTGCCGAGCG AGGTATTAAA GAGATACTTC GGGCAAGTAA TCACCAACTC ATACTTCATA
TATAGGCTTG CCAAAGGCGG CGATGTAAAT GTAAAGAGGT TGTTAAAGTG GGATGGGGTC
GTCATGACAG ACTCCGGGGC GTACCAAATT CTGCGCTATG GCACAGTCGA CGTAGACCCA
GACGAGATTC TGCTGTATCA ACACAAGATC GGGAGCGACA TAGGCGTAAT CTTGGACCTG
CCCTTTGACT ATGAAGAGCC CTACCACAGC GCGTTGTTGA AAGTGGAAGA AACGCTAAGA
AGGGCGAGGA GGGCCACGCG CCTCTTAAAA GACTTAGACA TGCTAGTGGT GGCCCCCATA
CAGGGAGCCA CCTATCTCGA CCTACTGAGG AGATCTGCAA GAGAGCTCTC CCAAATGGGC
TTTCCCATTT ATGCGGTCGG TAGCCCCACT ACCCTCCTCG AGGAGTACAG GTTTGATACA
ATACTTGAGA TAGTCCTAGA GGCCAAGATG GCCATGGTTA GAGACGCTCC TTTGCACCTC
TTCGGCGCGG GGCACCCACT AATACTGCCC TTTGCCGTCG CGCTGGGAGT AGACCTCTTT
GACAGCGCGT CGTATATACT ATACGCGAGA GACGGGAGAA TAATGCTGAG AGACAGGACG
TTGCGCCTCG ATGACGCAAA GTCGGAGTAC CTCCCCTGTA GCACCAAGCT CTGCCAGACG
CCGGTAAAAG AGCTCAGAGA AATGCCGCGC GAAGAACGCA CCCTATTAAT CGCAGAGCAC
AACCTTGCGG TGCTCAGAGA GGAGCTGATG GAGATAAGGC AGAGGATCCA CGAGGGGACA
CTCTGGGAGT ACCTAGAGGC GAAAGCCCGG GCACACCCCT CCCTATACAG ATTCCTCAAA
AAATTAAGCA AATTCCGCCG CTACATCGAG GCGCTGGACC CAGAGACGCA CCCAAAGCCC
CACGGCCTCT TCTTCTACCA CGACACCTCA CCCTCAAGAC CAGAGCCGCT TCGACACTTC
ACAAGACTGG AAAACGTAGA TCCGCCGTCG AAAAAGGCCC TCGTGGTTAA AGCGAGCACA
AAGCCGTACA ATCGGAGCTG GGAATACCGA TATCTGAAAG AGCTAGTAGG CGAGCGTGTT
CACATAATTT TCTACGACCC CGTCTTCGGC GCCGTGCCTG AGGAGTTGGC AGAGGTGTAC
CCCCTGTCCC AAAACGAGGC CGAGGGCGAG AGCGAAGAGG CGAGGGCGCG CCTCTACGAG
TGGCTAAACC GATACGACGA AATATATACC TACGGCGTAG ATATTCCCTT AGTGGGGAAA
GCCGTGAGGC GCCTCTCTTC AATAGAGGAT GCTAGATATA TAGCTTAG
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| Protein sequence | MGVFEIVAKD LGGRIGRLYT KSGVVETPAL FPVVDPRKQE VPSEVLKRYF GQVITNSYFI
YRLAKGGDVN VKRLLKWDGV VMTDSGAYQI LRYGTVDVDP DEILLYQHKI GSDIGVILDL
PFDYEEPYHS ALLKVEETLR RARRATRLLK DLDMLVVAPI QGATYLDLLR RSARELSQMG
FPIYAVGSPT TLLEEYRFDT ILEIVLEAKM AMVRDAPLHL FGAGHPLILP FAVALGVDLF
DSASYILYAR DGRIMLRDRT LRLDDAKSEY LPCSTKLCQT PVKELREMPR EERTLLIAEH
NLAVLREELM EIRQRIHEGT LWEYLEAKAR AHPSLYRFLK KLSKFRRYIE ALDPETHPKP
HGLFFYHDTS PSRPEPLRHF TRLENVDPPS KKALVVKAST KPYNRSWEYR YLKELVGERV
HIIFYDPVFG AVPEELAEVY PLSQNEAEGE SEEARARLYE WLNRYDEIYT YGVDIPLVGK
AVRRLSSIED ARYIA
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