Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2145 |
Symbol | |
ID | 4909971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1983333 |
End bp | 1983818 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640125899 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001057026 |
Protein GI | 126460748 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTACTGCG AAATATGTGG GCGGCCCATA GAGGGGGAGC CTATAGCCAT AGAACTAGAT GGGGCAGTGT TGTACGTGTG CCGTAGTTGT GCGGCCAAGT ACGGCGGCAA GACTCTGTCC AAGACGCCTC AGCCGCAACA GCAGAAAAAG CCGGCTAAGC CAATTCCACA GCCCCAGCGT AGCCGCTTGC CGGAGCTGGA ACTAGTCGAC GACTTCGGCG ACGTTATTAG GAGGGCGCGG GAGAACTTGG GTCTCTCAAG AGAGACTTTG GCGGCTATGT TGGGCATAAA GGAGACGGTG CTGAGGAGAA TAGAGGCGGG CCAGCTACAG CCCGACCTAG CTCTTGCTAG AAAAATTGAA AAGGCGCTTG GGATTAGGAT TCTTGTCGAG AGCAGGGAGG AGACCGCGTC GAGCAGTAGC GCCAAGCTTG AAAAGGGGCT CACCTTGGGC GAGGTCGCTG AAATACGAGA CGAAGGTGAA GAGTAG
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Protein sequence | MYCEICGRPI EGEPIAIELD GAVLYVCRSC AAKYGGKTLS KTPQPQQQKK PAKPIPQPQR SRLPELELVD DFGDVIRRAR ENLGLSRETL AAMLGIKETV LRRIEAGQLQ PDLALARKIE KALGIRILVE SREETASSSS AKLEKGLTLG EVAEIRDEGE E
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