Gene Pcal_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2138 
Symbol 
ID4910087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1980248 
End bp1981168 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID640125892 
Producthypothetical protein 
Protein accessionYP_001057019 
Protein GI126460741 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA AGGTTAATAT CCGTGGTCAA GCCTCTGCGC CCGGATCGCT TGCCCACGTG 
CTCAAGGGCG TTAAGTTAAA GCTTGTGACA CTGTCGGGCA AGGGCGGCGT GGGGAAGTCG
TTGGTGACGG CTTCTGTGGC CTTGGGCTTT GCCATGAGGG GGTACAGCGT CGGCATACTG
GACGGGGACG TATATGGCCC CACGATCCCC AAGATGCTTG GACTCTCCGA TAGCACGCTG
TATGTGGATC AGAAAACTGG GAGAATACTC CCCGCGGTGG GCCCTCTTGG GGTTAAAGTT
GTGTCTATAG AGTTTGCGCT GCCCAGCGAC GACACGGCGG TAATTTGGAG GGCCCCCCTT
GTGAACCAGG CTTTGAGAGA CTTCATAGCC CAGGTGGAGT GGGGCCAGCT AGACGTATTG
GTGGTGGATC TCCCGCCGGG CACCGGCGAC GCGCCTCTCA CCATTGCGCA AAGCCTCCAG
GGGGGCCTCG ACGGAAGCAT CATTGTCACA ATTCCGACGG AGATCTCCAG GAGGATTGTG
GTAAAAGCCG TGGATTTCTC GCGCAAGTTA AACATAAGGG TGGCGGGCGT CGTGGAGAAC
ATGTGTTGTT TCAAGTGCCC AGGCGACGGC AAGGTGTACT ACATATTTGG GAAAGAGGCT
GGGAAGAGGA TTGCCGAAAG CGCGGGTGTG CCCTTCTTGG GGGGCATACC CATGGACCCA
GAGCTTTCCC ACTACCTTGA CTCAGGCCGG CTTCACGAGT TTTTAGCAAA GGATACGGAG
ACTTCGAGAG CCATACTCGC CGTTGTTGAC AAACTAGCCG AAATGTACAA GGAGAAGCTC
GCCCAGCAAG AGCAGCCAAA AGAGGAGAAG CCGAGGAGGA TCTCTCTATT GAAGTTGCCG
GGGGAGGAAG AGGAGGAGTA A
 
Protein sequence
MSVKVNIRGQ ASAPGSLAHV LKGVKLKLVT LSGKGGVGKS LVTASVALGF AMRGYSVGIL 
DGDVYGPTIP KMLGLSDSTL YVDQKTGRIL PAVGPLGVKV VSIEFALPSD DTAVIWRAPL
VNQALRDFIA QVEWGQLDVL VVDLPPGTGD APLTIAQSLQ GGLDGSIIVT IPTEISRRIV
VKAVDFSRKL NIRVAGVVEN MCCFKCPGDG KVYYIFGKEA GKRIAESAGV PFLGGIPMDP
ELSHYLDSGR LHEFLAKDTE TSRAILAVVD KLAEMYKEKL AQQEQPKEEK PRRISLLKLP
GEEEEE