| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2131 |
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| Symbol | |
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| ID | 4908249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1974807 |
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| End bp | 1975580 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640125885 |
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| Product | proliferating cell nuclear antigen |
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| Protein accession | YP_001057012 |
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| Protein GI | 126460734 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGG CCCGGGCGTT GTTTCCAAAG GGGAAGGAGC CGCGCTACGC CTTCGAGGTA
CTCATTCGCT TACTGCCAGA GGCCTCGCTC ACGTTTACAC AAGACGGAAT TTCAATAAAG
GCGCTCGACC CCACTAAGAC CTCTATCCTC GACTTATCCT TCTACGCGGC GAGCCTAGAG
GACTACGTCC TAGAGGAGGA GGTCAAGGTG GGCCTCATAT TCACCACGTT GAAGGACGTA
ATAAAGCGCA TAGGCGCCAC AGAGAAGCTT GAGGTAGAGG TAGACAAGGA GAGGAACAGA
TTCAACCTCT ACGTGTACCC AAAGAGGGGG AAGGAGGCCG GCCTCGTCCG CCGCTTCTCC
TTCCCCATAG TCTCAGTCAT AGAAGAGGAA ATACCAGAGC TTTCTCTCAC CTTTGACGCG
TCGTTTGAAG TAGACGCAGG TGTATTCGAC GACTTGTTGG CCATGGTGGA GGAGGTCTCC
GACTGGGTGC AGATCTCAGT CTCGCCGGAG GGGGTAACCA TTAGGGGCGT CGGCGAGGGC
GGCAAGGCGG CTGAGGCCAC GTTGAGTCAA AACGACGAGG CCTTGTTCAG CGTGTCGGCA
GAGGAGACCG TGACGGCCAA ATACACTGTT GAAACTCTGA GAGACATAAC AGGCAAGCTC
AAGAGCTTGT CCAAAAGGGT CAAGGTTGAG CTGTCTGAAA ACAAGCCCAT CAAGCTGACC
TATGAGTTTA CTACGGGCAC TTTTAAGACT ATTGTCGCGC CGAGGGCCGA TTAG
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| Protein sequence | MSVARALFPK GKEPRYAFEV LIRLLPEASL TFTQDGISIK ALDPTKTSIL DLSFYAASLE
DYVLEEEVKV GLIFTTLKDV IKRIGATEKL EVEVDKERNR FNLYVYPKRG KEAGLVRRFS
FPIVSVIEEE IPELSLTFDA SFEVDAGVFD DLLAMVEEVS DWVQISVSPE GVTIRGVGEG
GKAAEATLSQ NDEALFSVSA EETVTAKYTV ETLRDITGKL KSLSKRVKVE LSENKPIKLT
YEFTTGTFKT IVAPRAD
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