| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2128 |
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| Symbol | sdhB |
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| ID | 4908299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1973266 |
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| End bp | 1973976 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640125882 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001057009 |
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| Protein GI | 126460731 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTG TAATAGTTAA GGTAAAGAGA TACGACGGGT CTAAGAGCTG GTGGCAGGAG
TACAAGGTTG AGGTGCCCTC GGAAAGAATT TCTGTGCTCG ACGTACTGCT TAAAATTAAG
GAGGAGCAAG ACCCGACGCT GGCTGTGCGT TACAGCTGCC GCATGGCTAT CTGCGGGTCT
TGTGGCATGG TGATAAACGG TCTTCCTAGG CTTGCGTGTC AGACGTTGCT CTCAGAACTA
AAGGATTCGC GATTAACCGT GGAGCCTCTT TGGAACCACA AAGTTATAAA GGACCTCGTG
GTTGATACAG AGCCGGATTT TGAGAAAGTT AGGTCGGTTA AGCCGTACAT AATTAGGGAT
GCGAAGGAAA TTTACGGGAG TGATGCAGAG TTTGGACAAA GGCCCGAGGA GCTAGAGAAG
TACTACAACT TTGCATATTG CATCCAATGC GGACTGTGCA TGGCGGCGTG CCCAATACTG
GGCTCTAATG AGAAATTCCT AGGGCCTATG GCTCTTGCGG CTGCGTATAG GTGGAGCGCT
GATAGTAGAG ACCGAGGCTG GGAGATAAGG AGAGCAATAA TAGACGCAGA AGATGGGCTG
TGGCCATGCC ATTTGGCGTA CACGTGCAGT GCCGTGTGTC CGCGGGGGGT GGATCCGGGC
TATGCAATAC AACTGTTAAA AAGCGCGATA CTTAGGAGGC GGAGGCCATG A
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| Protein sequence | MKSVIVKVKR YDGSKSWWQE YKVEVPSERI SVLDVLLKIK EEQDPTLAVR YSCRMAICGS
CGMVINGLPR LACQTLLSEL KDSRLTVEPL WNHKVIKDLV VDTEPDFEKV RSVKPYIIRD
AKEIYGSDAE FGQRPEELEK YYNFAYCIQC GLCMAACPIL GSNEKFLGPM ALAAAYRWSA
DSRDRGWEIR RAIIDAEDGL WPCHLAYTCS AVCPRGVDPG YAIQLLKSAI LRRRRP
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