| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2119 |
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| Symbol | aspC |
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| ID | 4908668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1962390 |
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| End bp | 1963676 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125873 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001057000 |
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| Protein GI | 126460722 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCTCTCA AATTGCACTG GACTTCGGAC GTTACTCCGG AGAAGCACGG CGCAGAGGTT
GTAGTTGCTG GCTGGGTGTG GGAACTGCGC GACTTGGGGC GGGTGAAGTT TCTGGTTGTC
AGAGACAGAG AGGGCTTTGT GCAAGTCACG CTTAAGGCGG GGAAGACCCC TGAGCACCTC
TTGAAAATGT TTGGCGAGTT GAACAGAGAG GACGTGGTGT TGGTTAGGGG AGTCGTTGAG
GCTAGTAAAA TCGCGAAAAG TGGTGTCGAG ATTTTTCCAA GTGAGATAAC TGTTTTGAAC
AAGGCCAAGC CTCTGCCCTT GGACATTTGG TCTGAGTCTC CCGACTTGGC CACGCGCCTG
AGGTGGAGGT CTGTGGATTT GAAAAGGCCG CGCAACTTGG CGATATTCTC CTTTGCCTCA
GACGTGCTTA AGGCTATCCG CGGCGTGTTG TACGAGGAGA AGTTTGTGGA AGTGTTTACG
CCGAAGATTA TAGTGACTAG CACCGAAGGC GGCGCCGAGC TCTTCCCAGT GCTCTACTTT
GAGAGAGTGG CGTATCTCTC CCAGAGCCCC CAGCTCTACA AGGAGCAACT AACGGCGTCT
CTTGAGCGAG TGTTTGAGAT TGGCCCCGCT TACAGGGCCG AGAAGCATAA CACGGACTTC
CACCTCAATG AGTTTATCTC GGTGGACGCA GAGGCCGCGT TTATGAACTA CTGGGACATC
ATGGGCCTCC TAGAGAAGAT TGTGCACCGG CTGGCCGAGG TGGCGGCGTC GGCCGCCGAG
AGGCTGAGGG CCGTCGGCAT CTCGCCTCTG GAGCTCCCGC GGTCTAAAAT TCCAAGGGTT
GAATACGGCG AGGCGGTGGA TAAGCTGAGG CAGATGGGGT ACTCTGTGAG CTGGGGCGAC
GACTTGACTG TGGAAATGCA GAAGAGCTTG ATGAAGCTCT ATGGGCCGGT GTACTTCATA
GTGGACTTCC CAGCCGCGCT GAGGCCCTTC TACACCAAGA GGAAGGAGGG AGAGCTTAGC
GAGTCCTACG ACTTGATTAT CAACGGGTTA GAGATAGCCT CTGGAGCCAC GAGGATACAT
AGAAGAGACG AGCTAGAGGA GGAGATGCGC CGCCGCGGTC TTGACCCCAG GCTGTTTGAA
AGCCACCTCT CCGTCTTTGA CTACGGCATG CCTCCGCACG CGGGGTTCGG CTTGGGATTT
AACCGCCTCG TGACGGCTCT CTTAAACCTC GACAATGTGA GACACGCCAC GCTGTACCCA
AGGGACAGGT ATAGAGTTGA GCCCTAG
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| Protein sequence | MPLKLHWTSD VTPEKHGAEV VVAGWVWELR DLGRVKFLVV RDREGFVQVT LKAGKTPEHL
LKMFGELNRE DVVLVRGVVE ASKIAKSGVE IFPSEITVLN KAKPLPLDIW SESPDLATRL
RWRSVDLKRP RNLAIFSFAS DVLKAIRGVL YEEKFVEVFT PKIIVTSTEG GAELFPVLYF
ERVAYLSQSP QLYKEQLTAS LERVFEIGPA YRAEKHNTDF HLNEFISVDA EAAFMNYWDI
MGLLEKIVHR LAEVAASAAE RLRAVGISPL ELPRSKIPRV EYGEAVDKLR QMGYSVSWGD
DLTVEMQKSL MKLYGPVYFI VDFPAALRPF YTKRKEGELS ESYDLIINGL EIASGATRIH
RRDELEEEMR RRGLDPRLFE SHLSVFDYGM PPHAGFGLGF NRLVTALLNL DNVRHATLYP
RDRYRVEP
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