Gene Pcal_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2118 
Symbol 
ID4908764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1961770 
End bp1962393 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID640125872 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_001056999 
Protein GI126460721 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCTA GGCTGGTAGC CGAGTTAGTA AAGGAGGGCG TGATTAAGTC TGAGAGAGTA 
AAAAACGCAA TGCTGAAGGT GCCGCGTGAG GAGTTTGTGA CTCCGGAGTA TAGGATGATG
GCTTACGAAG ATAGGCCACT CCCCCTCTTC GCCGGGGCCA CAATCTCTGC GCCCCACATG
GTGGCCATGA TGTGCGAGCT CATCGAGCCG AGGCCCGGCA TGAAGATACT TGAGGTGGGC
ACTGGGTCTG GCTATCACGC GGCTGTCTGC GCAGAGGCTA TAGAGAGACA GGGCAAAGTG
TACACGGTGG AGATAGTGAG AGAGCTCGCC ATATTCGCCG CGCAGAACCT AGAGAGGTTG
GGATACCTCG GCGTAGTTGA AGTATACCGC GGAGACGGCA GACGGGGGCT TGAGAGGCAT
GCTCCCTTCG ACGCCGTGTT AGTAACCGCA GCTGCCTCTG AGATTCCAAA GGCGTTGGTG
GAACAGTTGA GAGAGGGGGG AGTCATGGTG ATACCAGTAG AAGAGGGGGT GGGACAGGTG
TTGTACAAAG TGGTGAAGAG CGGGGGGAAG GTTAAGAGAC AGGCGGTTAC ATACGTCCTC
TTCGTCCCCC TCAGAGAGGG CTAG
 
Protein sequence
MAARLVAELV KEGVIKSERV KNAMLKVPRE EFVTPEYRMM AYEDRPLPLF AGATISAPHM 
VAMMCELIEP RPGMKILEVG TGSGYHAAVC AEAIERQGKV YTVEIVRELA IFAAQNLERL
GYLGVVEVYR GDGRRGLERH APFDAVLVTA AASEIPKALV EQLREGGVMV IPVEEGVGQV
LYKVVKSGGK VKRQAVTYVL FVPLREG