| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2112 |
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| Symbol | |
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| ID | 4909438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1955976 |
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| End bp | 1957397 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640125865 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001056993 |
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| Protein GI | 126460715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAT CCCAGCTTCT TGCAATAGTT GTGTTAGTCG TTGTTGTGGG CGTCGTTGCA
TATATTCTGG GCACCATGCA ACAAGCGCCG CAGGTTACAC AGACGGCTCC CACACCCCCC
GCTCAGACGA CGGCGCAGGT AAAGAAAATC TCATTCTACA CCTGGTGGGC TGGCCTTGAA
AGATTTGCAA TAGATGCAGT TATTGGGAAC TTTACAAAGA AGACGGGTAT TCAGGTAGAG
AAAACCGCCG TGCCCGGCGG CGCTGGTGTA AACGCCAAAT TTGCAATTTT GGCATTAATG
CAGGCGGGGA ATCCGCCTGC GGCGTTTCAA GTGCACTGTG GGCCTGAGAT TCTGAGCTAT
ATCTATGTGG CTCCGAAGGG GGAGGCCAGC TTTGTAGAGT TGAGCAGTGT GGCAAAGGAA
ATAGATATGA CGACTCAAGC GCCTGACGTA CTTTCGGCGT GCTCCCTGAA CGGGAAAGTA
TACGCATTGC CAGTTAATAT ACACAGGGCA AATCTCATAT TTATAAATAA ACAGGTTTTA
GACAAAATTG GTGGTTCTGT TCCCAAGAGT TTAGACGACT TAGTTGCCCT ATGTAATAAG
GCAACCTCCA TGGGCATCCC ATGCCTACTG CAAGCCGGCG CCGACCAGTT CACAATACTG
CACTTATGGG AGCAAGTGTT TTTGGCCGTA GCCGGGCCGC AGAAGTTCAT AATATTTACG
TATGGAACAC TGCCCCCAGA CGACCCCTCT CTACGCCAGG CCACAGAGGT GTTCTTGACG
CTTTCGAAGA CATTTCCTGC TAATTGGCCT TCTCTGGATT GGACGGGGGC TGTGGCAGAC
TTAGTTGCTG GAAAAGGCTT GGCGCATGTA GATGGCGACT GGGTAGTGGG GTTGATATAC
AACGTCTATC CACAGGTGAA GATGTGCCCC TACACTGCTG TCACGCCAGA CTGCAATATA
ATAGTGGCTC CATTCCCTGG AACTCAAGGT ATTTACAACC TAGTTATAGA CGCGGTGGCA
GTACCCGCTG GGTCTCCCAC TACGCAGATG GGGATAGAAT TTGTGAAATA CTTCGCGGGA
CCGGAGGGGC AGTCGATTTT CAACCCGCTT AAGGGCTCCA TAGCGGTTTA TAAGAACATA
GACCCAGCCA TATATCCCAC GCCTATACAG AGGTGGGAGG TGGAGGAGTA TAGGAATGCC
AAGGCCTATG TATTTAGCCT AACACACGGC GCATTATTCT CTGACGTGTG GCAGTCATTG
CTACAACAGT CCATTGTACT CGTACAAACG GGTCGGACCG ACTTATGGTA CAATACGTTG
GCCAGCGCCC TCAATACCGA GAGATCCCTC TGGAAGGATA CTTGGTACAT GGGAGCGCCT
GGGAAACCCT TCGGCGGCTA TCAGCCACCT TGGGTTAAAT GA
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| Protein sequence | MKTSQLLAIV VLVVVVGVVA YILGTMQQAP QVTQTAPTPP AQTTAQVKKI SFYTWWAGLE
RFAIDAVIGN FTKKTGIQVE KTAVPGGAGV NAKFAILALM QAGNPPAAFQ VHCGPEILSY
IYVAPKGEAS FVELSSVAKE IDMTTQAPDV LSACSLNGKV YALPVNIHRA NLIFINKQVL
DKIGGSVPKS LDDLVALCNK ATSMGIPCLL QAGADQFTIL HLWEQVFLAV AGPQKFIIFT
YGTLPPDDPS LRQATEVFLT LSKTFPANWP SLDWTGAVAD LVAGKGLAHV DGDWVVGLIY
NVYPQVKMCP YTAVTPDCNI IVAPFPGTQG IYNLVIDAVA VPAGSPTTQM GIEFVKYFAG
PEGQSIFNPL KGSIAVYKNI DPAIYPTPIQ RWEVEEYRNA KAYVFSLTHG ALFSDVWQSL
LQQSIVLVQT GRTDLWYNTL ASALNTERSL WKDTWYMGAP GKPFGGYQPP WVK
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