| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2110 |
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| Symbol | |
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| ID | 4910036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1954352 |
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| End bp | 1955158 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640125863 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001056991 |
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| Protein GI | 126460713 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC TCGCACATCT ACTGATAGTA GTTATTGGCA TCTTTTGGGC AATCCCAATT
TATACTCTAA TAGTAGGCGT CGTAAAACCT CTTTCAGACG TCCTTGCCAC GCCGGTATAT
ACGCCTCCAA ATAGGCTAGA TTTTAGCGCA CTATATAAAG TGGCCCAGGA GTTGGCACCA
GTTCTATTAA ACACTGCGCT AGTAGTGGTG CCTACTGCGC TTGGGGCGAC GCTGATAGGC
GCCTTGGGAG CATATGCATT ATGGAGAAGT AGGGCCAAGA GCAAAGACCT ATTAATGATA
CTAGTCGCTA TTGCGACATA TCTACCATAT CAATCCGCGG CAGTTCCCTT GGCTAGATTC
ATGACTTATA TAGGTCTTTT TGATACTCTA TATGGCATAG CACTAGGACT TTTAATATTT
TTTATACCAT TTGCAACACT TATGATGTTA ATATTCATAA CAGCGTTGCC CAAATCTGTG
GTAGAAGCGG CAGAGATAGA TGGAGCAAGT GAATTCGCGA TATTTAAGAG CGCCGTGCTC
CCCCTGCTGG GTCCCGGCCT CACTTCTACT GCTACCTATT TGACCATCAA CGGGTGGAAT
AACTTCTTCA TACCACTGGT GCTTTCAAAA ACCTATAACA ATCACATAAC TCTCAAGGTA
TTCAGCTACA TTGGGCAATC TGGCAATTTA TACAACGAGA TGTTCGCTGC CGCGCTTATA
TCTTCTCTAC CTCCTCTGCT ACTATTCATA GCACTCGGCC GATACTTTAT AAGAGGACTA
CTTGTGCTCG GATCAGGAGG AAAATAG
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| Protein sequence | MKILAHLLIV VIGIFWAIPI YTLIVGVVKP LSDVLATPVY TPPNRLDFSA LYKVAQELAP
VLLNTALVVV PTALGATLIG ALGAYALWRS RAKSKDLLMI LVAIATYLPY QSAAVPLARF
MTYIGLFDTL YGIALGLLIF FIPFATLMML IFITALPKSV VEAAEIDGAS EFAIFKSAVL
PLLGPGLTST ATYLTINGWN NFFIPLVLSK TYNNHITLKV FSYIGQSGNL YNEMFAAALI
SSLPPLLLFI ALGRYFIRGL LVLGSGGK
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