| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2109 |
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| Symbol | |
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| ID | 4909579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1953938 |
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| End bp | 1954324 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125862 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001056990 |
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| Protein GI | 126460712 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATAAGA GGATTCTAGT GGCATATGAC GGCTCTGACC ACGCAAAGAA GGCGGTTGAA
CACGCCGTAT CGCTTGCGAA GGTATTGAAC TCTTCTCTAT ACGTTATCAC AGTAGCCGTG
GACCCCTCGC AAGAGGCCTT GGAAAAAGCC AAGAGGATTG CCGCAGAGGC GGCGGAGAAA
ATTGCCAGTA GCGGCCTCGC GGTGTCCGAC GTCGCGGTGA GGAGCGGCGT GCCTGCGAAC
GAGATATTAA ACTATGCGGA GGAGATTAGG GCCGACTTAA TAGTGATGGG CTCGAGGGGG
CTGTCGACGA TTCAGCGGCT TGTCTTGGGC TCTGTTTCAC AGGCCGTGGC ATCTAGGGCG
CGGGTCCCCG TCTTAATAGT CAAGTAG
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| Protein sequence | MYKRILVAYD GSDHAKKAVE HAVSLAKVLN SSLYVITVAV DPSQEALEKA KRIAAEAAEK
IASSGLAVSD VAVRSGVPAN EILNYAEEIR ADLIVMGSRG LSTIQRLVLG SVSQAVASRA
RVPVLIVK
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