| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2105 |
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| Symbol | |
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| ID | 4909745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1951050 |
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| End bp | 1951958 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125858 |
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| Product | protein of unknown function RIO1 |
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| Protein accession | YP_001056986 |
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| Protein GI | 126460708 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATAAAAG ACGTCGTAGA GGCGTATGGC CAGCTGGAGA AGAGGGATTT GAGAGTTCTG
AGGATGATTG AGGCTGGGCA TAGGAGGTAC GAATTTGTGC CACAGGAGGT TATTGAGAGG
TGGTGCAGAT GTAGACGCGA AGAGGTGGCG CAGATAATTC GGCGGTTGCA CTACCTCGGC
CTACTACGCC GCAATGTTGC CCCATATCTT GGGTGGAAGA TAACGGCGCA AGGCTACGAC
GTGCTTGCAA TACATACTCT AAGGGTTAAG AGAAAGGTCT TGAAGCTGTC TCCCACGCCC
GTCGGCGTTG GCAAGGAGGC GGTAGTTTAC GTGGGGGAGA GCCCCTCTGG CTTTAAACTC
GCCGTCAAGT TCCACAGGGG CGGAGTCTCT GTCTTTAGGT ATGAGAAGGC GTTTCAAAGA
CTTGTGAAAA AGTACGCGCA CCTCGCCCAG GTATACGAAA CTAGGCTCTC TGCGCTTGCC
GAGTACTTTG CCCTTGAAAA AGTGTTCGAA GCGGGGGGGC ACGTCCCAGA GCCCATAGCG
GTGAATAGAC ACGTCGTTAT TATGGCATAT ATAGACGGCG TAGAGTTGTA TAGATGTAGG
AGTTGCGACT TTAGACGAGT GGCGGAGGAC GTGTTAGAGA CGGTGGCCAC GGCCTTGCGC
ATAGGCATCG TCCACGGAGA CCTTTCTCCC TACAACGTCA TTGCCGGAGA GCGCGGCTAC
GTCATCGACT GGCCGCAGTG GATGCCTACA GATAGCCCAG GCGCCGAGGC GTATCTAAGA
CGCGACCTTG AGAACATCTC AGCGTTTTTC CGAAGGGTTG GGGTTGAGCT TCAGTTAAAG
GACTTCGAGC TCGGCCGCGG CATGGGGGAC GCGTTTGTGG AGCTCATAAA TAAAAACCTG
AGAATGTAA
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| Protein sequence | MIKDVVEAYG QLEKRDLRVL RMIEAGHRRY EFVPQEVIER WCRCRREEVA QIIRRLHYLG
LLRRNVAPYL GWKITAQGYD VLAIHTLRVK RKVLKLSPTP VGVGKEAVVY VGESPSGFKL
AVKFHRGGVS VFRYEKAFQR LVKKYAHLAQ VYETRLSALA EYFALEKVFE AGGHVPEPIA
VNRHVVIMAY IDGVELYRCR SCDFRRVAED VLETVATALR IGIVHGDLSP YNVIAGERGY
VIDWPQWMPT DSPGAEAYLR RDLENISAFF RRVGVELQLK DFELGRGMGD AFVELINKNL
RM
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