Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_2102 |
Symbol | |
ID | 4909975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1947838 |
End bp | 1948098 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640125855 |
Product | LSM family small nuclear ribonucleoprotein |
Protein accession | YP_001056983 |
Protein GI | 126460705 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAGT CGTCGCAACA AGTAAAGCTC CCATCTCCTA TTAAAGTGCT TACAAAGATG TTAAACAAGG AGGTGGTGGC GCGGCTTAAG GGCGGCATTG CCGTAAAAGG CGTATTGACC GCCTACGACA GTTGTATGAA CCTAGTGTTG GACGACGCCG CTGAGCTCGA CCGAAGTGGA GAACCAGTCA CTCGGTATGG CCGTATAGTG GTCCGCGGGT CGCAAGTTAT ATATGTCTCA GCCATCGACG TGTCCTCATG A
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Protein sequence | MSKSSQQVKL PSPIKVLTKM LNKEVVARLK GGIAVKGVLT AYDSCMNLVL DDAAELDRSG EPVTRYGRIV VRGSQVIYVS AIDVSS
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