| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2100 |
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| Symbol | rps9p |
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| ID | 4910042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1947181 |
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| End bp | 1947609 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640125853 |
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| Product | 30S ribosomal protein S9P |
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| Protein accession | YP_001056981 |
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| Protein GI | 126460703 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | [TIGR03627] archaeal ribosomal protein S9P |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTGGG TCTCTATCTT GCAGGAGAAC CCCAGAGTCA TTATCTCTGT AGGGAAGAAG
AAAACTGCGG TAGCCAGGGC CATAATTAAG CCGGGGATGG GGCGGGTGAG AATTAATGGA
TATCCCCTTG AGCTTTGGCC GATAGAAATG GCGAGAGTCA AGATGCAAGA GCCTCTCATT
CTCGCCGGCG ATTTGGCTAA GAAGGTGGAT ATTGAGGTTA ATGTGAGAGG TGGGGGGTAT
ATGGGGCAGG CAATTGCCAC TAGGATCGCC ATTGCCAGGG GTCTTGTAGC TTATTTCCAG
AGCGAGGAAT TGAAGAAGCT GTACGAGGAG TACGACCCCT ACATGCTTAA GGGAGATCCC
CGTAGGACTG AGCCTAAAAA GCCTGGAATA AAGCACGCGA GAAGCAAAAG GCAGAAGGCT
TATAGATGA
|
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| Protein sequence | MPWVSILQEN PRVIISVGKK KTAVARAIIK PGMGRVRING YPLELWPIEM ARVKMQEPLI
LAGDLAKKVD IEVNVRGGGY MGQAIATRIA IARGLVAYFQ SEELKKLYEE YDPYMLKGDP
RRTEPKKPGI KHARSKRQKA YR
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