Gene Pcal_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2098 
Symbol 
ID4910089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1946239 
End bp1946607 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content52% 
IMG OID640125851 
Product50S ribosomal protein L18e 
Protein accessionYP_001056979 
Protein GI126460701 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1727] Ribosomal protein L18E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCTA ATCCCACGGG TCCGACAAAT AGGCAGTTGA GGATGCTTAT CAGATTTCTT 
AGAAAGGCCG CCACTGCCAA CTCTGCCAAC ATATGGAGGG CCATTGCCGA ACTCGTGGAG
AGGCCTAGGC GGAGTAGAGT TGTAGTCAAT GTGGGCAAGC TAAATAGAGT TGCCAATGAT
GGAGACGTAG TTGTAATCCC TGGGAAGTTG CTTGGCGGAG GCGAGCTCAA AAAGCGTGTC
GTTGTAGCGG CCGTCAGCGT AACTCCAAAG GCGTGGAAGA AGGTGGTAGA GGCCGGCGGA
GAGGTTTTGA CAATACCTGA GTTAGTTAGG CGGAATCCCA AGGGGAGCGG CGTAAAGATA
GTGATATGA
 
Protein sequence
MPPNPTGPTN RQLRMLIRFL RKAATANSAN IWRAIAELVE RPRRSRVVVN VGKLNRVAND 
GDVVVIPGKL LGGGELKKRV VVAAVSVTPK AWKKVVEAGG EVLTIPELVR RNPKGSGVKI
VI