Gene Pcal_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2094 
Symbol 
ID4910118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1944231 
End bp1944536 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content51% 
IMG OID640125847 
Product50S ribosomal protein L30e 
Protein accessionYP_001056975 
Protein GI126460697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1911] Ribosomal protein L30E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACA TAGGCAGAGA GTTGCAGGTG GCAATAAACA CTGGCAAGGT GATTATAGGG 
CTTAGGGAAA CTAAGAAGTC TCTCCTAACT GGCGCGCCGA AGTTGGTAAT AATAGCGGCA
AATGCCCCCA GGTGGGCTAG AGAAGACATA GAATACTATG CGAAGCTGGC GGGAGTGCCC
ATTTTCACAT TTCCAGGTTC GAGTATAGAA CTGGGCGCCG CGGCGAAGAG GCCTCATAAG
ATAATGGCAC TCGCCGTAGT TGACCCAGGT CAGAGCGAAA TTTTGAAGCT TGTGGAGCAT
GCCTGA
 
Protein sequence
MIDIGRELQV AINTGKVIIG LRETKKSLLT GAPKLVIIAA NAPRWAREDI EYYAKLAGVP 
IFTFPGSSIE LGAAAKRPHK IMALAVVDPG QSEILKLVEH A