Gene Pcal_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2088 
Symbol 
ID4909940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp1934153 
End bp1934725 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID640125841 
ProductH+-transporting two-sector ATPase, E subunit 
Protein accessionYP_001056969 
Protein GI126460691 
COG category[C] Energy production and conversion 
COG ID[COG1390] Archaeal/vacuolar-type H+-ATPase subunit E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTT TCGAAGATTT AATCAACGCA AAGATCAAGG AGCTGGAAGA TCTTAAAAAG 
AACCTGTTAA TCGATGTTGA GACTAAGATT AGGAAGGAGG CCGAAGCCGT CGTGAACAAG 
TCGCTTGAAC GAATAGCCAC GGTGGAGAGC GAGACGTTGC TTGAAAGAGA GAAGATTTTG 
TATGACGCCG TTGTTGAATC GAGGAAAATG ATCGCAGAGA CCTATGAGTC TCTACTTCAA 
GACCTCATAA ATTCAATATA CAATGAAATA GAGAGGATGA GGGGAAGCGA GCGTTATATA 
AACTTCCTCT CTAGACTCCT TGAAAACGCA GTAACCTACA TCCAGTCAAA AGAAGTGGTG 
ATTTACGCCT CCCCTAAGGA TAGAGGCGTT GTAGAAACCT TGGCAAGGAA GCTTGGTCTG 
TCCGGACTCA TAGCAGAGAG GGATATGAAG GGCGGCGTGG TGGTGGCGTC GAAAGACGGC 
TCCATTGTAG TCGACTATTC GATAGAGTCC ATTATAGCTA ACAAGGTGGA AGAGATAAAA 
CACCTCCTCT ACGAGATGAC TTATGAGCGG TAG
 
Protein sequence
MSLFEDLINA KIKELEDLKK NLLIDVETKI RKEAEAVVNK SLERIATVES ETLLEREKIL 
YDAVVESRKM IAETYESLLQ DLINSIYNEI ERMRGSERYI NFLSRLLENA VTYIQSKEVV 
IYASPKDRGV VETLARKLGL SGLIAERDMK GGVVVASKDG SIVVDYSIES IIANKVEEIK 
HLLYEMTYER