| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2078 |
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| Symbol | |
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| ID | 4909278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1926124 |
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| End bp | 1927731 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125831 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056959 |
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| Protein GI | 126460681 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3356] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGACTT TTGAACGCGC CTATTCCATC CTCTTTGGCA AGTCTGCCAA GAACATAGCC
GTCGTAGCAA CGCTACTGCT GGCTCTACTG GCTACGATTG AGAGCTTGAG CCACCCACTT
GCCCTACTTT ACTACGCCGT ATTTACGCTG GCCATGTTCG CCGTAGTGTT TGTGGCAGAG
AGAGACGTGA TTAATCCCAG GAGGGCTTAT TACGTCTCCG CCGTGTCGGC CACTGCGACG
GCGTTATTCG ACGTGTTGTT TAAAAAGCCG CCTCTCGCCT TTGCCCTAAT TGGCGCCTCC
ATAGTTGCCG TCGTTTTGCA GTCTCTCAAG TGCAAGTCGC CGGCCTTCTT AGCCCCCCTC
TTCACAACCT CGGTTTTATA CTATGCGCTA GGGTTCGCCG CCCTAGCCGT GGCCACGTTA
CTATACGCCG CCGTTATATA CGGCATAAAG CCCGTGATTA ACAGAATAAC CGGCGGCCTA
GATGCCATGT GCATGTTTTC TAGCTTTATA TACGCAGTGT TTGCCGAAGA CGACGTAATA
GAGGACGCGT TTAGAGAGCT TGGAACTGTG GAGAGAGTCC CTCTTCACCT CTACGTAATT
GGCAAGAGGC ATGTGGTAGT GGTATCAGAC TTTCACCCTG GGCCTTTTAG GCATATTGGG
GGAGGCATGT TGGTGGATAT TTTAAACAGA GAGGTTGAGA AACTTGGCTT CACTTTCACG
TTTTTACACG GCGTGGGTAG CCACGAGAGA GACCCCGTCT CTCAACATGC CGTATCTAAG
ATAGTCAACG CGGTTAAGGA CGCCTTGTAC TATATGCAAG ACGGAGCGCC GGCAAGCGGC
GTGGCTCCCA CTAAAGTGGT TATTGGCGAT GTAAAGTTGG TGGGATTTAG CTTGGGGACT
TTGCCTCACC TCGCGGTTGT GAGTAGGGTC AACTCTGCCA CAGATGATAT TCCGCTCTGG
GTTGCCCGGC GCGTAGAGGG CGGTATGTAC GTACTTGTGG ACGCGCAGAA TAGGTTTGAT
GGAGTGGTGA GGTGGCGGGA GGCCGACGTG GAGAACTTGG CTGAGGCAAT CAAAGCGCTA
CACGAGGCTC CCCACTGCGG CGCTTTCGAA ATCGGCGTAG GCAAAGCCAG CGCGGAGCAT
ATAGATCCGC TGGGGCTTGA GATTGGGCCA GCCGGAGTCT CAGCCATAGC AGTGACGTGC
GATGGGAGGA GGGGGCTCCT CATAGTGTTC GATGGGAATA ACTTAGACAG GAAACTTTAC
GACGAGTTAG TGAAGAGGTA CGGGTCAAGG TACGACGTGG TTGAAATAGC CACTACAGAT
ACTCACAGGT CTACCGGTGT CGGATTTGGC AAGGGGTACC GCGTGGTGGG CGAGAGGCTA
AGCCACCAGC GAATTTTGGA GGTGGTGGAC AGGGCTGTTA AAGCGGCAGA AGCCTCTCTA
GGCCCGCATA GAGTATCATA CCGGAGGCTA GAGGTGGAGG CGGAGGTCTT GGGGGAGCTG
GGGTTTCAGA GAATTCAGAG GGCGGTCAGA GTATACAAGA GGGTCGGCGC GTTAATCGTG
TCTGTGATAT TTGTTTTGCC TCTGGTCGTA ATTTCGCTGT TGGCATAA
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| Protein sequence | MRTFERAYSI LFGKSAKNIA VVATLLLALL ATIESLSHPL ALLYYAVFTL AMFAVVFVAE
RDVINPRRAY YVSAVSATAT ALFDVLFKKP PLAFALIGAS IVAVVLQSLK CKSPAFLAPL
FTTSVLYYAL GFAALAVATL LYAAVIYGIK PVINRITGGL DAMCMFSSFI YAVFAEDDVI
EDAFRELGTV ERVPLHLYVI GKRHVVVVSD FHPGPFRHIG GGMLVDILNR EVEKLGFTFT
FLHGVGSHER DPVSQHAVSK IVNAVKDALY YMQDGAPASG VAPTKVVIGD VKLVGFSLGT
LPHLAVVSRV NSATDDIPLW VARRVEGGMY VLVDAQNRFD GVVRWREADV ENLAEAIKAL
HEAPHCGAFE IGVGKASAEH IDPLGLEIGP AGVSAIAVTC DGRRGLLIVF DGNNLDRKLY
DELVKRYGSR YDVVEIATTD THRSTGVGFG KGYRVVGERL SHQRILEVVD RAVKAAEASL
GPHRVSYRRL EVEAEVLGEL GFQRIQRAVR VYKRVGALIV SVIFVLPLVV ISLLA
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